Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0455 ATGGATCGCCAATCCATCTTCTCTCTTTTTGGACTCATATTTTCCTTGTCTCTTGCATCACAAGCCACCAGTGACGGACAATTACAGTTTCTTTCTCTAATGAAGAAGTCTCTCCCGGGGAAATACCCGCTAAATTGGGATGTCACAGATGGAAAACCTGTCTGCAACTTCACTGGAGTTTTCTGCAACAACCAAGGGGAAGTCATCAATCTCGACATCTCCGGTTGGTCCCTTTCTGGAACCTTCCCTTCAGATATATGCTCCTATCTGCCAGAGTTACGTTTTCTACGTCTCGGCCACAATCGTTTGAGAGGAAAATTCCTTGATAGCATCATCAACTGTTCTCACTTAGAAGAGCTCAACATGAATCATGTGTACCATACAGGAACCCTTCTAGATTTCTCACCTATGAAATCTCTAAGGATCCTGGATTTGTCATACAATTCCTTCAGAGGTCAGTTCCCGATGTCAGTATTTAATCTTTCCAATCTTGAGGTGCTTAACTTCAATGAGAACGCTGGTTTCAATATATGGGAGCTGCCGGAGGATATGTATAGGATGAAAAACCTCAAGTCTGTGATCTTGTCGACATGCATGGTGCGTGGCCGAATCCCTGCATCCATAGGAAACGTTTCGACTCTGGTTGATCTTGAATTGAGTGGAAATTTTCTCACGGGTCAAATTCCCGAAGAGCTTGGAATGCTAAAAAACTTGCTGCAACTTGAACTTTACTATAACCAACTTATTGGCAATATACCCAAGGAGCTAGGAAATCTCACGGAGCTCAGAGACTTGGACATATCAGTCAATAAGCTGTCGGGAAGTATCCCAGAATCTGTGTGTCGTCTTCCCAAGCTTGAAGTCTTGCAGCTATACAACAATAGTCTTACAGGAGAAATCCCAGGTGTGATAGCAAACTCAAAAACCTTAAGAATATTGTCTCTTTATGACAATTTTTTGACTGGAGAAGTCCCAAGAAATCTGGGTCAGTTGTCAGGAATAGTAGTTCTAGATTTATCCGAGAACAAACTGTCTGGTCCATTGCCAACAGAGGTTTGCAAGGGAGGTAAACTGATGTACTTCCTCGTTCTGGATAATTTATTTTCTGGAGAGCTACCTGACAGTTATGCAAAGTGCTGGACAATGTTGAGGTTTCGAGTCAGCAACAACCATTTGGTGGGCTCAATTCCCGAGGGGCTCCTTGGTCTCCCGCACGTTTCCATAATTGATTTTAGTAACAATAATTTAAGTGGTCCAATATCCGAGACTATTGGAAATCCTAGAAACTTGTCAGAACTATTCATACAGAAGAATAGGATTTCAGGGGTTATACCTCCGACCATCTCTCGAGCTACCAATCTGGTCAAGATGGATTTCAGCAACAACCTTTTGTCCGGTCCAATACCTCTCGAAATCGGCAATCTTAAAAGGCTTAATTTGCTGATGTTGCAAGGGAATAAGCTGAATTCTTCCATCCCCGGCTCAGTTTCCTTATTAAAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTTTTGACCGGTAGCATCCCTGAAAGATTCTCTGATCTGCTACCAAACTCTATCAACTTTTCAAATAACTTGCTCTCTGGTCCAATTCCTCCATCGTTGATAAAAGGAGGTTTAGTCGAAAGTTTCTCGGGGAATCCTGGTCTGTGTGTGTCGCCCGTCTATGCCAACTCATCGGATCAAAATTTTCCTTTATGTTCAAACAATAGCAACAAGAAGAGGCTAAGCACTTTCTGGGTAGCAGGGATTTCAGTGGTTTTGATCATAACTGGATCAGCCTTGTTTTTGAAACGTAGGTGTAGCAAAGAGAGGGCTGTAGTGGAACATGACGAAACACTGTCTTTGCCATTCTTCTCGTATGACGTGAAGAGCTTTCACAGGATAACAATTGACCAACGGGAGATCATCGAGGCCATGGTCGAAAAGAATATAGTGGGGCATGGAGGGTCAGGTACAGTGTACAAGATCGAGTTAAAAAGCGGTGAATTTGTTGCTGTGAAGCGGCTATGGAGTCGAAAGTCAAAGGATTCGGTTCCAGATCAGGATAGTTTAGCTCTAGACAAGACATTGAAAACTGAGGTGGATACCCTGGGAAATATAAGACACAAGAACATAGTCAAGCTGTACTGCTACTTCTCAAGTTTGGATTGCAGCTTGTTAGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATGCTCTACACAAAGGTTCGGTCCATTTGGATTGGCCTACTCGCCATAAGATTGCACTAGGGACAGCACAGGGTCTGGCGTACCTCCACCATGATTTGCTCCCTCCTATAATTCATAGAGACATCAAGTCAACTAACATCCTTCTCGATGTTGATTACCAACCCAAGGTTGCAGATTTCGGGATTGCCAAGGTATTGCAGGCAAGAGGAGGGAAGGACTCCACATCTACTGTTATTGCAGGCACATATGGTTACTTGGCACCAGAATATGCTTATTCTCCCAGAGCAACTATCAAGTGTGATGTCTATAGTTTTGGGGTGATTTTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCAGAATTTGGAGAGAACAGAAGCATCGTATATTGGGTTTCAAACAAAGTGGACAGCAAGGAAGGGGCTAGTGAGGTATTAGACAAGCAATTGGAAGGGTCTTACAAAGAGGAAATGATTCAGGTGCTCCGAATTGCTATCCGTTGCACCTACAAGGCTCAAGCTCTTCGGCCGACCATGAAAGAGGTAGTTCAAGTGCTGATTAAAGCAGACCCGTCTGGCAAGTTGTCCAATAAGACCAAAGAAACATCAAATGCCACTTTACCAAAGAACTCATCATTTGAACTGTAG 2871 0.433 MDRQSIFSLFGLIFSLSLASQATSDGQLQFLSLMKKSLPGKYPLNWDVTDGKPVCNFTGVFCNNQGEVINLDISGWSLSGTFPSDICSYLPELRFLRLGHNRLRGKFLDSIINCSHLEELNMNHVYHTGTLLDFSPMKSLRILDLSYNSFRGQFPMSVFNLSNLEVLNFNENAGFNIWELPEDMYRMKNLKSVILSTCMVRGRIPASIGNVSTLVDLELSGNFLTGQIPEELGMLKNLLQLELYYNQLIGNIPKELGNLTELRDLDISVNKLSGSIPESVCRLPKLEVLQLYNNSLTGEIPGVIANSKTLRILSLYDNFLTGEVPRNLGQLSGIVVLDLSENKLSGPLPTEVCKGGKLMYFLVLDNLFSGELPDSYAKCWTMLRFRVSNNHLVGSIPEGLLGLPHVSIIDFSNNNLSGPISETIGNPRNLSELFIQKNRISGVIPPTISRATNLVKMDFSNNLLSGPIPLEIGNLKRLNLLMLQGNKLNSSIPGSVSLLKSLNVLDLSNNLLTGSIPERFSDLLPNSINFSNNLLSGPIPPSLIKGGLVESFSGNPGLCVSPVYANSSDQNFPLCSNNSNKKRLSTFWVAGISVVLIITGSALFLKRRCSKERAVVEHDETLSLPFFSYDVKSFHRITIDQREIIEAMVEKNIVGHGGSGTVYKIELKSGEFVAVKRLWSRKSKDSVPDQDSLALDKTLKTEVDTLGNIRHKNIVKLYCYFSSLDCSLLVYEYMPNGNLWDALHKGSVHLDWPTRHKIALGTAQGLAYLHHDLLPPIIHRDIKSTNILLDVDYQPKVADFGIAKVLQARGGKDSTSTVIAGTYGYLAPEYAYSPRATIKCDVYSFGVILMELITGKKPVEAEFGENRSIVYWVSNKVDSKEGASEVLDKQLEGSYKEEMIQVLRIAIRCTYKAQALRPTMKEVVQVLIKADPSGKLSNKTKETSNATLPKNSSFEL 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0455 956 FunFam leucine-rich repeat receptor-like protein kinase TDR 734 939 - -
Lele28g0455 956 FunFam Receptor protein-tyrosine kinase CEPR1 283 569 - -
Lele28g0455 956 Gene3D Phosphorylase Kinase; domain 1 632 733 - -
Lele28g0455 956 SUPERFAMILY Protein kinase-like (PK-like) 639 927 IPR011009 -
Lele28g0455 956 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Lele28g0455 956 Pfam Protein kinase domain 650 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0455 956 Gene3D Transferase(Phosphotransferase) domain 1 734 951 - -
Lele28g0455 956 SMART LRR_typ_2 161 187 IPR003591 -
Lele28g0455 956 SMART LRR_typ_2 331 355 IPR003591 -
Lele28g0455 956 SMART LRR_typ_2 235 259 IPR003591 -
Lele28g0455 956 SMART LRR_typ_2 283 306 IPR003591 -
Lele28g0455 956 SMART LRR_typ_2 499 522 IPR003591 -
Lele28g0455 956 SMART LRR_typ_2 90 115 IPR003591 -
Lele28g0455 956 SMART LRR_typ_2 475 498 IPR003591 -
Lele28g0455 956 FunFam receptor protein-tyrosine kinase CEPR1 631 733 - -
Lele28g0455 956 SUPERFAMILY RNI-like 67 368 - -
Lele28g0455 956 SMART serkin_6 648 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0455 956 SUPERFAMILY L domain-like 283 541 - -
Lele28g0455 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Lele28g0455 956 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 243 928 - -
Lele28g0455 956 ProSiteProfiles Protein kinase domain profile. 648 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0455 956 FunFam Leucine-rich repeat receptor-like protein kinase 177 279 - -
Lele28g0455 956 MobiDBLite consensus disorder prediction 937 956 - -
Lele28g0455 956 Gene3D Ribonuclease Inhibitor 304 570 IPR032675 -
Lele28g0455 956 PRINTS Leucine-rich repeat signature 499 512 - -
Lele28g0455 956 PRINTS Leucine-rich repeat signature 334 347 - -
Lele28g0455 956 Gene3D Ribonuclease Inhibitor 25 303 IPR032675 -
Lele28g0455 956 MobiDBLite consensus disorder prediction 935 956 - -
Lele28g0455 956 ProSitePatterns Protein kinases ATP-binding region signature. 654 676 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0455 Lele-ChrLele28 2905733 2908899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0455 23 944 Receptor kinase-like Gene Family AT5G49660 65.912 0.0 1234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele28g0455 Pkinase 1.4e-45 CL0016