Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0454 ATGTTCCTTCCCTCCAGCTTTCACCGCGTCTCTTCACTCCTCGCCGTACTCTGTTTCGTTTCAATTCTCGTCGGAGTCAACTCCGATGAACCAGAACGTCAACTTCTTCTCAATCTCAAAGCAGCTCTTCAGCCATCAAATCCCACCGTGTTTGACTCGTGGAGCGCTTCTAATTCAGTATGCAGCTTCAACGGAATCACGTGCGGTCCAAGCGGTTCGGTGACGGAAATCGATCTCTCCAATCATATACTTTCTGGTGTTCTTCCTTTCGACTCCATTTGCCAGCTCCGTTCACTCGAGAAGCTCTCATTCGGGTTCAATTCATTGTCTGGAAACATCTCCAAGGATTTGAGAAACTGCGTCAAATTGAAGTACTTGGATTTGGGCAATAATATTTTCTCGGGGCCATTCCCTGACATTTCTACTCTCACTCAATTGCAGTATCTGTATTTAAATCAGAGCGGCTTTTCTGGAACTTTCCCATGGATGTCACTGCAAAATATGACGAGTCTTGAGGTGTTAAGCGTCGGAGATAACCCCTTTGCCCTTACTCCTTTTCCTACTGAACTTGTGAAGCTCAGGAACTTGAGATGGCTATATCTGTCAAATTGCACTCTTGGTGGGAAAATTCCAACAGGGATCGGCAACCTCACAGAGCTCATAAACTTGGAATTTTCCGACAACCTTATATCCGGGGAGATCCCTTCAGAGATGGGGAAGCTTCAGAATCTATGGCAGCTTGAGATGTACGGCAATTCGTTCACTGGGAAGCTTCCATATGGCTTAAGAAACCTCACGAGGTTACAGTACTTTGATGCGTCGATGAATAATCTGGGAGGCAATCTTTCTGAACTGAGGTTCTTGAATAATCTCGTTTCTCTGCAATTATTTGAAAACAAATTTTCCGGGGAAATCCCGCCGGAGTTTGGTGAATTCAGAAAGCTCGTGAACCTATCGCTTTACAGAAACAGCTTGACTGGTCCTATTCCCCAAAAGATTGGATCTTGGGCTGAGTTCAATTACATCGACGTGTCCGAGAATTTTTTGACCGGTACTATTCCTCCAGATATGTGCAAGAAGGGGAAGATGCGCGCGCTGCTTGTGCTTCAGAACAAGCTCACCGGTGAAATCCCGGCCACCTACTCGAACTGTTTGTCCCTGCGTCGATTAAGAGTGAGCAATAATTCTCTCTCCGGTGTCATTCCTGCTGGAATTTGGGGTTTGCCAAACGCGAAAATTATCGATGTTAAATTGAATCGCTTGGGAGGTTCAATTACTTCAGATATCAAGAATGCGAAGACTCTGGCTCAAATATTCGCAAGTCAAAACCTCTTATCCGGTGAAATACCAGAAGAGGTTTCAAAAGCTACCTCCCTGGTGACAGTTGACTTGAGCGAGAATCAAATTTCTGGAAAAATTCCAACAAGTATCGGAGAGCTTAAACAATTAAGCAGTCTAAATTTACAGCGCAACAAGTTATCTGGGCCGATTCCAGATTCTCTGGGTTCGTGCGAATCCCTCAGCGACATCAACCTATCAAAAAATTCACTATCGGAAAAAATGCCTTCTTCTCTGGGGTCTTTACCAGCTCTCAATTCTCTGAACTTGTCAAGAAATGACCTCTCTGGTGAAATTCCGGCGAGTCTTCCGCGTCTCCGATTGAGTCTCCTTGATTTATCAAGCAACAATTTAGCTGGTCCAATTCCACAAGGTCTGTCTTTTCGAGCTTACAACGGAAGCCTTGACGGAAACCCAGATCTCTGCACCATGGACGTCGACGTGACGTCCTTTAAGCGTTGCTCTATACATTCCGGCATGCCCCGACATATCCGAACCCTCCTCGTTTGCTTCTCAATAGGCTTAATCACGCTCTTCCTTTGTCTAAGCCTTTACATGCAAGTAAAGAAGAAGGAGAAGTATCGAGAACGTTCTCTGAAGGAAGAATCTTGGGATATAAAATCCTTCCACGTGCTTAGCTTCACAGAGAACGAGGTTCTAGATTCCATCAAGGAAGAGAATCTCATAGGAAAAGGAGGCTCCGGGAACGTGTACAGAGTCACTCTTTCCAACGGAAAAGACCTCGCCGTGAAGCACATATGGAACACCGACACCGGCTGTCGGAAAAGAAGCCTGGGCAGTGCTCCGATGATCGGAAAACGTGGGGGGAAATCAAAGGAATTCGACGCGGAGGTTGAGACACTGAGCTCAATAAGGCACGTTAATGTGGTGAAGCTGTATTGCAGCATAACGAGTGAGGATTCGAATTTGTTGGTGTACGAGTATCTGCCAAATGGAAGTTTATGGGACATGCTTCACACGAATGGGAAGATGGAGCTTGATTGGGAGACGAGGTACGAGATTGCCGTGGGAGCAGCGAAAGGGTTAGAGTACCTTCATCATGGGTGCGAGAGGCCTGTGATTCACAGGGACGTGAAGTCAAGTAACATTTTGTTGGATGAGTTCTTGAAGCCCAGAATTGCAGATTTCGGATTAGCTAGGATTGTTCAAGCCAACGTTGGCAAAGATTCTACGCATCTAGTTGCCGGGACTCATGGCTATATTGCCCCGGGTAAGCTTTACTTTAACTCTGAATATGGGTACACATACAAGGTGAACGAGAAGAGCGATGTTTATAGTTTTGGAGTGGTGTTAATGGAGTTGGTGACGGGGAAGAGGCCTATAGAACCCAAGTTTGGGGAGAACGAGGATATAGTGAACTGGGTTAGCAACAAAGTGCAGAAGCAGAATAAGGAGAAGATAATGGGAATGGTAGACTCGAGAATTCCAGAGGGTTACAGAGAGGAGGCAATGAAGGTGTTGAGGATAGCTATAATGTGCACGGTGAGGCTTCCAGCACTAAGACCCAACATGAGAAGTGTGGTTCAGATGCTGCAAGACGTTGAGCCTAAGTTGGTGGGAATAGTTGGGGCCAAGGATGATTCTGCTAATAAGAAAGTGCAACTACATGAGGTTGCCAAGCTTCCCTAA 2988 0.4592 MFLPSSFHRVSSLLAVLCFVSILVGVNSDEPERQLLLNLKAALQPSNPTVFDSWSASNSVCSFNGITCGPSGSVTEIDLSNHILSGVLPFDSICQLRSLEKLSFGFNSLSGNISKDLRNCVKLKYLDLGNNIFSGPFPDISTLTQLQYLYLNQSGFSGTFPWMSLQNMTSLEVLSVGDNPFALTPFPTELVKLRNLRWLYLSNCTLGGKIPTGIGNLTELINLEFSDNLISGEIPSEMGKLQNLWQLEMYGNSFTGKLPYGLRNLTRLQYFDASMNNLGGNLSELRFLNNLVSLQLFENKFSGEIPPEFGEFRKLVNLSLYRNSLTGPIPQKIGSWAEFNYIDVSENFLTGTIPPDMCKKGKMRALLVLQNKLTGEIPATYSNCLSLRRLRVSNNSLSGVIPAGIWGLPNAKIIDVKLNRLGGSITSDIKNAKTLAQIFASQNLLSGEIPEEVSKATSLVTVDLSENQISGKIPTSIGELKQLSSLNLQRNKLSGPIPDSLGSCESLSDINLSKNSLSEKMPSSLGSLPALNSLNLSRNDLSGEIPASLPRLRLSLLDLSSNNLAGPIPQGLSFRAYNGSLDGNPDLCTMDVDVTSFKRCSIHSGMPRHIRTLLVCFSIGLITLFLCLSLYMQVKKKEKYRERSLKEESWDIKSFHVLSFTENEVLDSIKEENLIGKGGSGNVYRVTLSNGKDLAVKHIWNTDTGCRKRSLGSAPMIGKRGGKSKEFDAEVETLSSIRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDMLHTNGKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLARIVQANVGKDSTHLVAGTHGYIAPGKLYFNSEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEPKFGENEDIVNWVSNKVQKQNKEKIMGMVDSRIPEGYREEAMKVLRIAIMCTVRLPALRPNMRSVVQMLQDVEPKLVGIVGAKDDSANKKVQLHEVAKLP 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0454 995 Pfam Leucine Rich Repeat 195 217 IPR001611 GO:0005515
Lele28g0454 995 FunFam Leucine-rich repeat receptor-like protein kinase TDR 285 602 - -
Lele28g0454 995 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Lele28g0454 995 Gene3D Ribonuclease Inhibitor 512 589 IPR032675 -
Lele28g0454 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Lele28g0454 995 SUPERFAMILY L domain-like 63 354 - -
Lele28g0454 995 Gene3D Ribonuclease Inhibitor 184 285 IPR032675 -
Lele28g0454 995 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Lele28g0454 995 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 762 982 - -
Lele28g0454 995 Pfam Protein kinase domain 671 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0454 995 Gene3D Phosphorylase Kinase; domain 1 652 761 - -
Lele28g0454 995 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 964 - -
Lele28g0454 995 ProSiteProfiles Protein kinase domain profile. 669 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0454 995 FunFam Probable inactive receptor kinase RLK902 29 186 - -
Lele28g0454 995 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Lele28g0454 995 FunFam Leucine-rich receptor-like protein kinase family protein 187 284 - -
Lele28g0454 995 FunFam Receptor-like protein kinase HAIKU2 652 761 - -
Lele28g0454 995 SMART serkin_6 669 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0454 995 Gene3D Ribonuclease Inhibitor 286 358 IPR032675 -
Lele28g0454 995 Gene3D Ribonuclease Inhibitor 361 511 IPR032675 -
Lele28g0454 995 SUPERFAMILY L domain-like 284 588 - -
Lele28g0454 995 SUPERFAMILY Protein kinase-like (PK-like) 658 964 IPR011009 -
Lele28g0454 995 SMART LRR_typ_2 480 504 IPR003591 -
Lele28g0454 995 SMART LRR_typ_2 193 217 IPR003591 -
Lele28g0454 995 SMART LRR_typ_2 96 120 IPR003591 -
Lele28g0454 995 SMART LRR_typ_2 528 552 IPR003591 -
Lele28g0454 995 Gene3D Transferase(Phosphotransferase) domain 1 762 985 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0454 Lele-ChrLele28 2897480 2900550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0454 7 985 Receptor kinase-like Gene Family AT1G09970 61.890 0.0 1175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele28g0454 Pkinase 4.2e-41 CL0016