Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0453 ATGACCAATCCGGAGTCTAGTCGCCACCACAGGACCAGAGCTCGGCCGTCTGCGGCGCGGACGCCGGTTCGGCCCAGGGTTCCGCTCAGGCAGTTGCTTCGGGTGGCTTCTGTGGCTGGTGGTATTCAATTTGGCTGGGCTCTTCAGCTCTCCCTTCTCACGCCTTATGTACAGCAGCTCGGGATTTCTCACGCTTGGTCCAGTATCATCTGGCTCTGTGGCCCGCTCTCTGGTCTCTTCGTTCAGCCTTTGGTTGGGCACATGAGTGATCGCTGCACCAGCCGGTTCGGCCGCCGGAGACCGTTTATCTTGGCTGGAACATTGTCGATCATTTTCTCGGTTTTGGTCATTGGTTACGCTGCTGACATTGGTTGGTTGCTTGGTGACTCGGAGAAATCGAGGCCGCGGGCTGTGGGCTTTTTTGTGTTCGGCTTTTGGATTCTGGACATGGCCAACAACATGACTCAAGGTCCCTGTAGAGCTTTGCTTGCTGATCTCACTGGCAAGGATCATCGAAGGACACGTGTGGCAAATGCTTATTACTCCCTGTTTATGGCTATCGGTAACATTCTTGGCTATGCTACTGGATCATACAGTGGCTGGTTCAGAATTTTCTCTTTTACCTATACTCCTGCGTGCAATGTCAGTTGTGCAAATCTCAAGTCTGCTTTCATTTTGGACATTGTTTTCATTGCTGTCACCACATATATCAGCATTACTGCTGCTCATGAAGTGCCTCTAAGTTCAAATGGTGCACCTCCTGCTGAAGAAACAGGAGAATCGGGAAGTGCGGGAGAGGCTTTCATGTGGGAGCTATTCGGGACATTCAGATATTTTTCGACCCCTATATGGATAATTTTGTCTGTTACTGCTTTGACTTGGATTGGATGGTTTCCGTTTATCCTCTTTGATACTGATTGGATGGGCCGAGAGATTTATGAGGGTGATCCAAATGAAGGTCCTAAGTATGATGCTGGAGTTAGAATGGGAGCACTTGGTTTATTGCTAAATTCAGTTGTTCTTGGAATAACATCATTGCTCATGGAGAGGCTTTGCCGGAAGCGAGGGGCTGGCTTTGTATGGGGAATTTCAAACATCCTAATGGCTATCTGCTTTATAGGAATGCTTGTGGTGACCTATGTGGCAAAAAACATCGGCTATCTAGGCAAAGATCTACCACCAACTGGCGTTGTGATTGTGTCATTGATAATTTTTACAATTCTTGGGTTTCCTCTGTCAATCACTTACAGTGTTCCATATGCGTTAATTTCCTCACACATTGAGTCTTTGGGACTTGGCCAAGGGTTATCAATGGGTGTACTAAATTTGGCCATAGTGATCCCGCAGATAGTGGTGTCCCTCGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGGAACGCCCCAGCCTTTGCTGTGGCAGCTCTTGCATCACTTGTTAGTGGACTCATTGCAATCTTGGCTATTCCTCGATCTGGTGTTCAAAAGTCCAGAACCTACACTTGA 1506 0.4821 MTNPESSRHHRTRARPSAARTPVRPRVPLRQLLRVASVAGGIQFGWALQLSLLTPYVQQLGISHAWSSIIWLCGPLSGLFVQPLVGHMSDRCTSRFGRRRPFILAGTLSIIFSVLVIGYAADIGWLLGDSEKSRPRAVGFFVFGFWILDMANNMTQGPCRALLADLTGKDHRRTRVANAYYSLFMAIGNILGYATGSYSGWFRIFSFTYTPACNVSCANLKSAFILDIVFIAVTTYISITAAHEVPLSSNGAPPAEETGESGSAGEAFMWELFGTFRYFSTPIWIILSVTALTWIGWFPFILFDTDWMGREIYEGDPNEGPKYDAGVRMGALGLLLNSVVLGITSLLMERLCRKRGAGFVWGISNILMAICFIGMLVVTYVAKNIGYLGKDLPPTGVVIVSLIIFTILGFPLSITYSVPYALISSHIESLGLGQGLSMGVLNLAIVIPQIVVSLGSGPWDQLFGGGNAPAFAVAALASLVSGLIAILAIPRSGVQKSRTYT 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0453 501 Gene3D MFS general substrate transporter like domains 28 488 IPR036259 -
Lele28g0453 501 SUPERFAMILY MFS general substrate transporter 30 491 IPR036259 -
Lele28g0453 501 Pfam MFS/sugar transport protein 47 428 - -
Lele28g0453 501 FunFam Sucrose transport protein 26 489 - -
Lele28g0453 501 PANTHER SUGAR TRANSPORTER 27 487 - -
Lele28g0453 501 MobiDBLite consensus disorder prediction 1 22 - -
Lele28g0453 501 TIGRFAM GPH_sucrose: sucrose/H+ symporter 27 492 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lele28g0453 501 CDD MFS_SLC45_SUC 32 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0453 Lele-ChrLele28 2881134 2885222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0453 2 496 Sucrose Transporter Gene Family AT1G09960 69.368 0.0 697
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0447 25 2800995 2805638 Lele28g0453 28 2881134 2885222 hybridization
Lele26g0458 26 2905153 2909367 Lele28g0453 28 2881134 2885222 hybridization