Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0447 ATGTCTCCGCCGCTGCTCGGCATAGGCGAGGAAGAAGGTAAAACCAATGTTACTTTGCTGGTTTCCTCAACTGCCACTGAAAATGCACGCCTCAATGCCACAAAGTTAAAAGAACGCAACTATATGGGATTATCTGATTCTTCAACCGTGGACAGCTCAGGCCTGTCCTACTCAGATGAGACTAAAAGTAACCTAAACCTAAAAGCCACAGAGCTGAGGCTTGGTCTTCCAGGATCGCAGTCTCCAGACCGAGACTCGGATCTCTGCTTGAGAACCTCTACTCAATTGAATGAGAAACCCCTGTTTCCATTGCGCCCATTGACCGATGATCACCACTCTTCAACAAAGACTGCTGTTTTGGGCAGCAAGAGAGGGTTCTCAGATGCCATGAATGGGTTCTCAGAGGCAAAGTTTCTGGCTGATTCAGAGGCCAATAATGTACTATCACCCAGGCCTTCTCATAACATGGGATTAAAAACTGGCTCTATACTTGAGAATCTCGGGGCTCAAGCCAAAGCCAACGAACTAACACCAACAAAGGCAACACTTGAGAGGCCTCATTCTGTCAATGAAACTAGAGCAAATCTCGAAGGTTCTGCAAATAACAATAGCAATGCACCAGCTACGAAGGCCCAGGTTGTAGGTTGGCCTCCTATAAGATCATTTAGGAAGAATTCTCTGGCTACTACTTCAAAGAATACTGAAGAAGTAGATGGAAAAGCAGGATCTGGTGCATTGTTCATCAAAGTCAGTATGGATGGTGCTCCATATTTAAGGAAAGTAGATTTGAAGAACTACTCTGCATATCCGGAACTGTCATCCGCACTAGAGAAGATGTTCAGCTGTTTTACCATAGGTCAATATGGCTCTCATGGAACTCAAGGCAGGGAGATTTTAAATGAAAGCAAGCTGAAGGATCTGCTTCATGGGTCTGAATTTGTCCTAACCTATGAGGACAAAGATGGGGACTGGATGCTTGTGGGTGATGTTCCTTGGGAGATGTTCATTGATACATGCAGGAGGCTGAGGATCATGAAGAGTTCCGATGCTATTGGTCTGGCTCCAAGGGCTGTGGAAAAAAGCAAGAGTAGGAACTAG 1098 0.4545 MSPPLLGIGEEEGKTNVTLLVSSTATENARLNATKLKERNYMGLSDSSTVDSSGLSYSDETKSNLNLKATELRLGLPGSQSPDRDSDLCLRTSTQLNEKPLFPLRPLTDDHHSSTKTAVLGSKRGFSDAMNGFSEAKFLADSEANNVLSPRPSHNMGLKTGSILENLGAQAKANELTPTKATLERPHSVNETRANLEGSANNNSNAPATKAQVVGWPPIRSFRKNSLATTSKNTEEVDGKAGSGALFIKVSMDGAPYLRKVDLKNYSAYPELSSALEKMFSCFTIGQYGSHGTQGREILNESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLAPRAVEKSKSRN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0447 365 MobiDBLite consensus disorder prediction 195 215 - -
Lele28g0447 365 MobiDBLite consensus disorder prediction 195 210 - -
Lele28g0447 365 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 65 352 IPR003311 GO:0005634|GO:0006355
Lele28g0447 365 FunFam Auxin-responsive protein 240 357 - -
Lele28g0447 365 ProSiteProfiles PB1 domain profile. 245 347 IPR000270 GO:0005515
Lele28g0447 365 SUPERFAMILY CAD & PB1 domains 243 346 - -
Lele28g0447 365 Pfam AUX/IAA family 70 356 IPR033389 -
Lele28g0447 365 Gene3D - 240 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0447 Lele-ChrLele28 2843730 2846182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0447 259 350 B3 DNA Binding Superfamily AT1G19220 31.522 5.41e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele28g0447 AUX_IAA 8.3e-91 CL0072