Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0444 ATGGACGTCGCCTTTTTCTTTATATATGTATGTATCGTTGATCTTGTTGGCCTCTTAGCCAGAAGATGCTTACTCCGAGATGTGATGTCGTGTGATTGTTTCGCTTGGATTAGTGTTATGATGCTGAACGAGTATGTGAGGAATTGTTCATTTTCGACTCGGTATGAATGCGCTGATATGGATACCAACGAAGGCATAAGCATCTATCCATTGCACCGCTGTAAAACTCTTCATCTGGTTAGACATGCACAAGGGACTCACAACGTAGCAGGAGAAAAAGACCATGAAGCATACATGTCTTATGATTATTTTGATGCACAATTAACCCCTCTTGGCTGGAAGCAGGTTGATCATCTGCGGTCGCACGTTCAAGCATGCGGTCTTTCCAAGAAAATCGAATTAGTGATTTCTTCCCCCTTGTTGAGGACCATGCAAACTGCAACTGGAGTCTTCGGTGGTGAAGCTTACACTGACGGGATTGATGCTCCTCCTCTGATGAAGGAAAATGTGGGACCTAGTGAACATGCTGTAATTTCTACTCTGAATTCCCCTCCATTTATAGCATTTGAGCTCTGCCGGGAGCATTTGGGAGTTCATCCTTGTGATAAGAGAAGAAGCATTCATGAGTACCGGGATATGTTCCCTGCAATTGACTTTTCACTTATAGAAAGTGAAGAGGACATTTTGTGGACACCTGACATTAGAGAGAAGGATGAAGAAGTTGCTGCTAGGGGGCTGAAGTTTTGGAAATGGTTATGGACACGTAAGGAAAAGGAGATAGCAATTGTTTCTCACAGTAGTTTTCTACTTCATGCCCTAAGCGCTTTTGGAAATGACTGCCATCCAACTGTGAAGAGTGAAATATGCAAACACTTTGCTAATTGTGAGCTGCGTTCAATGGTTATAGTTGACAGAGGTTTGATTGGATCAGATAAGTCAACTACAAACTATCCTGGCAAGATTCCTCATGGCCTTGATCTTCCCAGTAATGTTGCTGACGAGAAAAATAAAGGGAATAGGCCGACCCAGTAA 1032 0.4293 MDVAFFFIYVCIVDLVGLLARRCLLRDVMSCDCFAWISVMMLNEYVRNCSFSTRYECADMDTNEGISIYPLHRCKTLHLVRHAQGTHNVAGEKDHEAYMSYDYFDAQLTPLGWKQVDHLRSHVQACGLSKKIELVISSPLLRTMQTATGVFGGEAYTDGIDAPPLMKENVGPSEHAVISTLNSPPFIAFELCREHLGVHPCDKRRSIHEYRDMFPAIDFSLIESEEDILWTPDIREKDEEVAARGLKFWKWLWTRKEKEIAIVSHSSFLLHALSAFGNDCHPTVKSEICKHFANCELRSMVIVDRGLIGSDKSTTNYPGKIPHGLDLPSNVADEKNKGNRPTQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0444 343 Pfam Histidine phosphatase superfamily (branch 1) 77 150 IPR013078 -
Lele28g0444 343 Gene3D - 71 320 IPR029033 -
Lele28g0444 343 FunFam Phosphoglycerate mutase-like protein 1 71 318 - -
Lele28g0444 343 SUPERFAMILY Phosphoglycerate mutase-like 75 305 IPR029033 -
Lele28g0444 343 MobiDBLite consensus disorder prediction 319 343 - -
Lele28g0444 343 CDD HP_PGM_like 76 147 IPR013078 -
Lele28g0444 343 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 71 309 - -
Lele28g0444 343 SMART PGAM_5 76 272 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0444 Lele-ChrLele28 2811732 2817195 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0444 28 2811732 2817195 Lele01g0111 01 663967 665736 CCT
Lele28g0444 28 2811732 2817195 Lele03g0112 03 628797 630573 CCT
Lele28g0444 28 2811732 2817195 Lele04g0108 04 632708 634432 CCT
Lele25g0438 25 2732030 2736771 Lele28g0444 28 2811732 2817195 hybridization
Lele26g0449 26 2828616 2834154 Lele28g0444 28 2811732 2817195 hybridization