Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0441 ATGGTAGTGAGGAAAGTGGGGAAGTATGAGATTGGGAGGACGATTGGGGAGGGCACCTTCGCCAAAGTGAAGTTCGCGCAGAACACAGAGACCGGGGAGAGTGTCGCCATGAAAGTGCTCGATCGCAGCACCATCATCAAGCACAAAATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTTAGACATCCATATGTCGTCCGTCTCCACGAGGTTCTAGCAAGCCGTACTAAGATCTATATCATATTGGAGTTCATTACAGGTGGCGAATTATTTGATAAAATAGTACACCATGGGCGTATTAGTGAAAATGAATCAAGAAGATACTTCCAACAGCTTATTGATGGTGTAGACTTTTGCCACAGCAAGGGAGTTTACCATAGAGATTTAAAGCCTGAAAATCTCTTACTTGATTCACAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTACCAGAACAGGGGGTCAGTATCCTTCGGACAACTTGTGGGACACCAAACTATGTAGCTCCTGAGGTACTGAGTCACAAGGGTTACGATGGTGCTATGGCAGATGTTTGGTCCTGTGGGGTTATCCTTTATGTTCTGTTGGCTGGATATCTTCCCTTTGATGAACTTGATCTTACCACCTTATACAGTAAGGAACATAGATCAGTTATCAGCAAAATGATATTTGATAAATATTGCTGTTAG 708 0.4251 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRISENESRRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYDGAMADVWSCGVILYVLLAGYLPFDELDLTTLYSKEHRSVISKMIFDKYCC 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0441 235 SUPERFAMILY Protein kinase-like (PK-like) 6 222 IPR011009 -
Lele28g0441 235 FunFam Non-specific serine/threonine protein kinase 2 230 - -
Lele28g0441 235 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Lele28g0441 235 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Lele28g0441 235 PIRSF ILK 4 228 - -
Lele28g0441 235 SMART serkin_6 9 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0441 235 ProSiteProfiles Protein kinase domain profile. 9 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0441 235 Gene3D Transferase(Phosphotransferase) domain 1 3 232 - -
Lele28g0441 235 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Lele28g0441 235 Pfam Protein kinase domain 9 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0441 235 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0441 Lele-ChrLele28 2798907 2800986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0441 1 226 CBL-interacting serine-threonine protein kinases AT4G24400 86.726 3.85e-147 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele28g0441 Pkinase 2.7e-67 CL0016