Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0424 ATGCAGAATACACTCAGCGAATTGGCGCAGGAAATTTCTTCAATTTCTAGGAACTTGGGAATCCCAGTAACAATCAGTTATTTAGGACTGTCGAATGACGTACGGATGGATGGTTTATGGATTCTGTCCCGGCTGTCTCACGACATTAGGGCCTACGATAATGGTGGATGCTGCAGTTTTCATCATAAACCAATGGTCGTTGGTCGATTACATTTGGTTACCATCAATCTTTTGCAACATGATTTGGTATGGTCATATGACGTTTTGCAAGGAATCCCTGTCACTACTCGGTTGATCCCAGCACTTGGTGTCATTGCCTTTGTTGTCTGTGTTCTTGAAACTCTTATGCGTATGCTTAGATCAGCTATTATTTATTATCCACTTGTAGATCCCAGTCCTTTTGGTATTAACTACAGCATTAATTGTATCAGGGCATTAGATCCGCTAAACCTACCTTCAGAAGCCAGCCAGGCAGTGAAGCAACGGCTGCTGAATTTTGTGAGATCTTTGTCAACTGTGCTCTCATTTGCTTACTGTTTATCAAGCTTAATTCAACAAGCACAAAAATTCTTTATGGAGGCAAACGAGTCCAATGATGCAAGAAATATGGGCTTTGATTTTGCTGGGAAAGCTGTGTATACTGCTGTATGGGTTGCTGCTGTATCATTGTTCATGGAGCTTCTCGGTTTCTCCACACAGAAGTGGGTGACTGCTGGTGGTTTGGGTACAGTATTGCTCACACTAGCTGGCCGTGAGATATTTACAAACTTCCTTTCAAGTGTAATGATTCATGCAACCCGGCCATTTGTTGTAAATGAGTGGGTTAAAACAAAGATTGATGGATATGAGGTTTCTGGCATAGTAGAGCATGTAGGTTGGTGGTCACCAACAATAGTGAGAGGTGATGATCGTGAAGCAGTTCATATTCCTAATCACAAGTTCACTGTCAATGTTGTGCGGAATCTTACTCAGAGAACTCATTGGCGTATCAAGACTTACCTCGCTATTAGTCACTTGGATGTTAACAAGATTAATAATATTGTTGCTGATATGCGCAAAGTTTTGGCCAAAAGTCCTCTGGTGGAGCAACAAAAGTTGCACAGAAGGGTTTTTCTTGAGGAGGTCAATACTGAAAATCAGTCTCTTATGATATTAGTATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATTCCTGTGTGTCCAGGAGGCCATCCTTTTGGATCTTCTGAGAGTTATTAGTCATCATCGAGCCCGGCTAGCCACAACCATCCGCACAGTCCAGAAAATATACAGTGAGGCTGACTTGGAAAACATACCATTTGGTGACACCATCTTTACTCGCTCCAGAGCAGCAGAAAACCGCCCATTTCTACTGATAGAGCCGCCTTACAAAGTTAATGGTAAAGATAGAGCCAAGGCTCCTACTCGTTCAACACGTCCAAGTGACGAGAAAGATGCGAAAATTGATGAAACATTGACGTTTGATTCCAAAGATGACAATTTTGCAGCGACATCAGCATCAACATCAAGTTCAAATTCCAAGGATAAATCAAAGTCAATATCTGAAGCACAAGCTCAAAATTTGGGTTCTTATAGTACTGTCCAGATGACATCCAAAACCACGCAGCCCAAAAAAGAAAATGCAGGAGATGCCGCAAAGGGGCCCGCTGCCCCAGTAAACAAAGACCTTGCTCATAGTGTTGCCCCTGAAAATTCTGCTTCTTCGCACGAGTTTGCTGGTGGGGGAGATGCTGCTACTCCTGCTACATCTTCACAGGCAAAGCAGGACGAAGACAAACATGCTGTATCCACCTCACTGGTCAGGCCTTCCTTGGAAGAAAATATTGTTCTTGGCGTTGCCCTAGAGGGCTCGAAACGAACGCTTCCAATTGACGAAGAAATGACTCCACCTCCCATCCCCGCAGAGGCACAAGAATTTGCTGCCCAAAGAAATGAATATGGATCTGCTAGCAAGGATAAAAAGGATGGTCAAATTTCTACCCAGCAGCAGAGTGATTAG 2022 0.4308 MQNTLSELAQEISSISRNLGIPVTISYLGLSNDVRMDGLWILSRLSHDIRAYDNGGCCSFHHKPMVVGRLHLVTINLLQHDLVWSYDVLQGIPVTTRLIPALGVIAFVVCVLETLMRMLRSAIIYYPLVDPSPFGINYSINCIRALDPLNLPSEASQAVKQRLLNFVRSLSTVLSFAYCLSSLIQQAQKFFMEANESNDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWVKTKIDGYEVSGIVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQRTHWRIKTYLAISHLDVNKINNIVADMRKVLAKSPLVEQQKLHRRVFLEEVNTENQSLMILVSCFVKTSHFEEFLCVQEAILLDLLRVISHHRARLATTIRTVQKIYSEADLENIPFGDTIFTRSRAAENRPFLLIEPPYKVNGKDRAKAPTRSTRPSDEKDAKIDETLTFDSKDDNFAATSASTSSSNSKDKSKSISEAQAQNLGSYSTVQMTSKTTQPKKENAGDAAKGPAAPVNKDLAHSVAPENSASSHEFAGGGDAATPATSSQAKQDEDKHAVSTSLVRPSLEENIVLGVALEGSKRTLPIDEEMTPPPIPAEAQEFAAQRNEYGSASKDKKDGQISTQQQSD 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0424 673 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 74 669 IPR045042 -
Lele28g0424 673 MobiDBLite consensus disorder prediction 498 546 - -
Lele28g0424 673 Gene3D - 163 267 - -
Lele28g0424 673 MobiDBLite consensus disorder prediction 468 497 - -
Lele28g0424 673 MobiDBLite consensus disorder prediction 468 673 - -
Lele28g0424 673 Pfam Mechanosensitive ion channel 210 417 IPR006685 GO:0016020|GO:0055085
Lele28g0424 673 SUPERFAMILY Sm-like ribonucleoproteins 253 323 IPR010920 -
Lele28g0424 673 Gene3D - 268 321 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0424 Lele-ChrLele28 2620820 2626570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0424 82 665 Mechanosensitive Ion Channel Family AT5G10490 55.116 0.0 622