Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0421 ATGGTTGAAGGTAAAGCTTTTCGTGTTTGTTTGTCCGCAACAGGTTTCAGACACAGGAGTTTCTATGGTTTTGAGAGCTGGGTATATCAGAGTGCGCATTCTAAGGAACCCAGCTCGTCCTTCAAGTCAGTGGAATTGGATAACGGCAAACCAATTCTCAACTCCGCATCTAAGTCCGAGAGGAAATCAATGGAAGCATGCAAGAGCCATAGAGAAGCTGAGAGGAGACGCAGGCAGCGAATCAACGCCCATCTCTGCACTCTACGTTCTCTCCTCCCTAACGCCGTAAAGTCGGATAAGGCCTCGTTGCTAGCGGAGGTGGTCCGACGCGTCAAAGACCTGAGGAAACAGGCCGATGACGTGGCGGGCCTTCACGACGGAGACTTGTCGGGAAGCACTATAAGAGGAGAATCTGGGTCGAACCCCGGAGACTCGGAGCAGTGGGCGTTCCCGGGAGAGTCGGACGAAGCGACTGTGAGTTACTGCGACGGAGGTGGTGAGAGGAAACTCATGAAAGCCACGCTCTGCTGCCAGGACCGGCCCAACCTGAACCGAGATCTAGAGGAGGCGATCCGGTCGGTTCGGGCTAAGGCGGTGCGAGCCGAGATGATGACCATTGGTGGGCGGACCAAGAGTGTGGTTATGGTCCAATGGACTGGTGGAGAAGACGTAGAAGAAACAGAGGAGGCTGGAGAACTGGAACGGGCTTTGACGGCCGTCATAGAGAATCGGGCCCTCATGGGGCCTAGAATGGGCCGAATGACGTTGGGCCACAAACGGGCCAGACATTGTTACGGCTCACCTGATGAGGGCGGCGGCTTCTTGTTGAGGACAGCTAACATGTAA 846 0.5508 MVEGKAFRVCLSATGFRHRSFYGFESWVYQSAHSKEPSSSFKSVELDNGKPILNSASKSERKSMEACKSHREAERRRRQRINAHLCTLRSLLPNAVKSDKASLLAEVVRRVKDLRKQADDVAGLHDGDLSGSTIRGESGSNPGDSEQWAFPGESDEATVSYCDGGGERKLMKATLCCQDRPNLNRDLEEAIRSVRAKAVRAEMMTIGGRTKSVVMVQWTGGEDVEETEEAGELERALTAVIENRALMGPRMGRMTLGHKRARHCYGSPDEGGGFLLRTANM 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0421 281 MobiDBLite consensus disorder prediction 133 147 - -
Lele28g0421 281 Gene3D - 59 122 IPR036638 GO:0046983
Lele28g0421 281 MobiDBLite consensus disorder prediction 122 151 - -
Lele28g0421 281 SMART finulus 71 120 IPR011598 GO:0046983
Lele28g0421 281 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 114 IPR011598 GO:0046983
Lele28g0421 281 Coils Coil 184 204 - -
Lele28g0421 281 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 121 IPR036638 GO:0046983
Lele28g0421 281 Pfam Helix-loop-helix DNA-binding domain 67 114 IPR011598 GO:0046983
Lele28g0421 281 PANTHER TRANSCRIPTION FACTOR BHLH30 45 263 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0421 Lele-ChrLele28 2598249 2599658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0421 62 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.398 1.35e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele28g0421 HLH 9.5e-10 No_clan