Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0420 ATGATTGTATTCTGCTATAGACAGGAAAAGATGGTGTGGCTAATCCGTGACCGCTCCAAAAATGGTTCACTCGTCCGATCAACGTTTGATCTTGTGCGTTCGTTTGTTCATGGGAACTCCTCTTTGTGCTTACCCCTTTCTCCTCCAAACAGCTTCTCCCTGGGTTTCTCAAGAACAATGCCTCGCCCTAACTTCGCGAGGAGGGCAAGGAGTGTAGCAGCATTCTCGCCTTCGATGAAGGAGAAACCAGAGGCTCCAAATTATGTTGGACTCAGTCAAGAGTACAAAGGCCCAAACCTTGGAACCAGGATTGAAACTGATGATAGAAAACAGGACTTATTTGGTTTGATGAAACAGAGGTTTCTGAGTTTCAAGAAGCAGAAATACATGAAAGAGTTGGAGCATTTTCATGCTCTTGCTGAAGCTCAGTCCCCAAAGTTCATGGTAATAGCTTGTGCAGACTCTAGGGTATGCCCCTCTAACATTTTAGGATTTCAACCTGGCGATGCCTTCATGATACGTAACATCGCCAATCTTGTTCCTCCCATGACGAATGGAGCAACTGAGTGTAATGCTGCTCTTGAGTTTGCTGTAACCATTCTCAGGGTTGAGAATATTTTAGTTATTGGTCATAGCAATTGTGCTGGAATTGAAACGTTGATGAATATACAAGAAGATGTCGAATCAAGGAGCTTCATTAACAATTGGGTTGTTAATGGGAAAGTTGCCAAGTCGAGGACAAAAGCTGCCACAGCTCATCTTAGCTTTGGCCCTCAATGCAGATTCTGTGAGAAGGAGTCTGTAAACCAATCACTATTGAACTTGCTTAGTTACCCTTGGATAGAAGATAGAGTGAAAAAGGAGTTGCTTTGTCTTCATGGAGGATACTATGATTTCTCAAATTGCTCATTTGAGAAATGGACACTTGATTGGAGACGATGCAATGTTCAAGATCAAGAAGGAGAACGCAGTTATAATGTAAAAGACCAAGAATTTTGGTGTTGA 1005 0.4249 MIVFCYRQEKMVWLIRDRSKNGSLVRSTFDLVRSFVHGNSSLCLPLSPPNSFSLGFSRTMPRPNFARRARSVAAFSPSMKEKPEAPNYVGLSQEYKGPNLGTRIETDDRKQDLFGLMKQRFLSFKKQKYMKELEHFHALAEAQSPKFMVIACADSRVCPSNILGFQPGDAFMIRNIANLVPPMTNGATECNAALEFAVTILRVENILVIGHSNCAGIETLMNIQEDVESRSFINNWVVNGKVAKSRTKAATAHLSFGPQCRFCEKESVNQSLLNLLSYPWIEDRVKKELLCLHGGYYDFSNCSFEKWTLDWRRCNVQDQEGERSYNVKDQEFWC 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0420 334 Gene3D Carbonic anhydrase 105 316 IPR036874 GO:0004089|GO:0008270
Lele28g0420 334 CDD beta_CA_cladeB 120 307 IPR045066 GO:0004089|GO:0008270
Lele28g0420 334 SUPERFAMILY beta-carbonic anhydrase, cab 111 313 IPR036874 GO:0004089|GO:0008270
Lele28g0420 334 FunFam Carbonic anhydrase 109 316 - -
Lele28g0420 334 Pfam Carbonic anhydrase 148 301 IPR001765 GO:0004089|GO:0008270
Lele28g0420 334 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 152 159 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lele28g0420 334 PANTHER CARBONIC ANHYDRASE 104 311 IPR001765 GO:0004089|GO:0008270
Lele28g0420 334 SMART Pro_CA_2 140 308 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0420 Lele-ChrLele28 2595578 2597703 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0411 25 2492994 2499448 Lele28g0420 28 2595578 2597703 hybridization
Lele26g0423 26 2589007 2592574 Lele28g0420 28 2595578 2597703 hybridization