Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0417 ATGAAAGGTGAATATGTAGAGCAACAGGCCAAGGCCGATATTCCCCATATGTTCTCCAAGCTTCACCACCATCCCTTCTCCCACCATCCTTTCCAGCTCTCTCGCGAATCTCAGACCTCCGAGGAAGATGATACTCGCAGCGCCACCCCCAACCACCCTCAGAAGCCTATGTCCATCGAACCCTCCTCCGCCGCCGATGGCTCCAGCATTGAGGTCGTCAGGCGCCCTAGGGGCCGCCCTCCCGGCTCCAAGAACAAGCCCAAGCCCCCCGTCATCATTACTCGCGACCCCGAGCCAATCATGAGTTCTTTCATTCTCGAAGTCCCCGGCGGTACGGATGTCGTTGAAGCGATTGTTCGCTTTTGTCGCCACAAGAACACGGGTCTGTGTGTGTTAACGGCATCGGGCACCGTCGCTAATGTCACCCTCCGTCAACCCTCTACTACCCCTGGTGCTACCGTTACTTTTCACGGCCGTTTCGACATCTTATCCATATCCGCCACCTTTCTGGCCAACAAGCTATCGGGCGATTTGCCGTCGGTCCCCAACAGCTTCACGATATCTTTGGTGGGTCCGCAGGGTCAGATCGTTGGAGGCTTAGTCGCCGGTAGCTTGTTGGCGGCGGGAACCGTGTTCGTCATAGCCGCTTCCTTCAACAACCCATCTTACCACAGGTTGCCAGCCGAAGAGGACGTCAGGAACTCCGTCTCGGGAGGCGGCGGCCGAGATGGACAGTCCCCGCCGGTTTCCGGAGGCGGTGGGGAGAGTGGTCACGCGCATGGTGATTCGTGTGGGATGTCCATGTATAGCTGTCAACTGCCGTCTGATGTGATCTGGGCTCCAACAGCAAGACCACCATACTGA 864 0.5764 MKGEYVEQQAKADIPHMFSKLHHHPFSHHPFQLSRESQTSEEDDTRSATPNHPQKPMSIEPSSAADGSSIEVVRRPRGRPPGSKNKPKPPVIITRDPEPIMSSFILEVPGGTDVVEAIVRFCRHKNTGLCVLTASGTVANVTLRQPSTTPGATVTFHGRFDILSISATFLANKLSGDLPSVPNSFTISLVGPQGQIVGGLVAGSLLAAGTVFVIAASFNNPSYHRLPAEEDVRNSVSGGGGRDGQSPPVSGGGGESGHAHGDSCGMSMYSCQLPSDVIWAPTARPPY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0417 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 280 IPR014476 GO:0003680
Lele28g0417 287 MobiDBLite consensus disorder prediction 50 65 - -
Lele28g0417 287 PIRSF ESCAROLA 8 280 IPR014476 GO:0003680
Lele28g0417 287 MobiDBLite consensus disorder prediction 232 259 - -
Lele28g0417 287 FunFam AT-hook motif nuclear-localized protein 102 237 - -
Lele28g0417 287 ProSiteProfiles PPC domain profile profile. 98 239 IPR005175 -
Lele28g0417 287 CDD DUF296 104 218 IPR005175 -
Lele28g0417 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 230 - -
Lele28g0417 287 MobiDBLite consensus disorder prediction 21 94 - -
Lele28g0417 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 220 IPR005175 -
Lele28g0417 287 MobiDBLite consensus disorder prediction 35 49 - -
Lele28g0417 287 Gene3D - 101 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0417 Lele-ChrLele28 2579692 2580555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0417 1 287 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 61.017 2.29e-105 306