Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0407 ATGGCACCCAGTTTCGATTGCGTTTCCAGTCTTCTTTGCACAGAAGACAACATCGTATTTGATGATAATGATCACGAGAGTACGATGGGGGTGCCCGAGAATTCGTGGCATCAAACACACCATCGACTCCGCAATCCGAGCCTTTTATTTGACGATTCAACTGGGTTGCCATTGCAGAGTGATGAGAGTCTGGCGATTATGGTGGAAAAAGAATGCCAGCACATGCCTGCTGGCGATTACCTGAATAAGCTACGGACTGGGGTTTTGGACTCGGGGGCTAGGAAGGAGGCCATTGATTGGATTGAAAAGGTTCGTGCACATTTCCATTTTGGACCTCTCTGTGCATATTTATCCATAAACTACATGGATCGCTTCCTGTCTCTATATGAATTACCAAAGGGAAAATCTTGGTCAATGCAATTGCTTGCTGTAGCATGCTTGTCTCTCGCAGCCAAACTAGAGGAGAATGAAGTTCCCCTGTGTGTTGAATTGCAGGTGGCTGAATCAAAATTCATATTTGAAGCCAGAACGATCAAGAGAATGGAGCTTCTCGTGCTAAGCACACTTAAGTGGAGAATGCAACCGATCAGCCCTTTCTCCTTCATAGACTATTTCCTAAGCAAGATCAATGAAGATCAAACTCCACTACGAACTTCTACGCCAAAATCTATCCAACTTATATTGAATACTGTGAAAGCAATCGACTCATTGGAATTCAAGCCATCAGAAATAGCAGCAGCAGTGGCAATATTTGTTGTAGGGGGAACCCAAACTGTCAACGCAGAGAAAGCTATCTCTGTTCTTGCTCAACACATAGAACAGGAGAGAGTCTTGAAGTGTTTCAAAATGGTGCAAGAGTTGTCATCAAACAGCAGCACCAGCAGTTCTTCTGGTGCTCCTGTTCCTCCAAGTCCAATTGGGGTGTTGGATGCAGCATGTTTGAGCTATAAAAGTGATGAAATAGACGGTTCATGTTCAAGTTCAAGTTCTTCCCATAGTAATAGTCCAGAAGCTAAAAGGAGGAAGATAAACAAAACCTCTGGAACTGATCTATAA 1056 0.4366 MAPSFDCVSSLLCTEDNIVFDDNDHESTMGVPENSWHQTHHRLRNPSLLFDDSTGLPLQSDESLAIMVEKECQHMPAGDYLNKLRTGVLDSGARKEAIDWIEKVRAHFHFGPLCAYLSINYMDRFLSLYELPKGKSWSMQLLAVACLSLAAKLEENEVPLCVELQVAESKFIFEARTIKRMELLVLSTLKWRMQPISPFSFIDYFLSKINEDQTPLRTSTPKSIQLILNTVKAIDSLEFKPSEIAAAVAIFVVGGTQTVNAEKAISVLAQHIEQERVLKCFKMVQELSSNSSTSSSSGAPVPPSPIGVLDAACLSYKSDEIDGSCSSSSSSHSNSPEAKRRKINKTSGTDL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0407 351 PANTHER CYCLINS 61 292 IPR039361 -
Lele28g0407 351 SMART cyclin_7 99 187 IPR013763 -
Lele28g0407 351 Pfam Cyclin, C-terminal domain 197 295 IPR004367 -
Lele28g0407 351 MobiDBLite consensus disorder prediction 320 334 - -
Lele28g0407 351 SMART Cyclin_C_2 196 335 IPR004367 -
Lele28g0407 351 MobiDBLite consensus disorder prediction 335 351 - -
Lele28g0407 351 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Lele28g0407 351 MobiDBLite consensus disorder prediction 320 351 - -
Lele28g0407 351 CDD CYCLIN 94 186 IPR013763 -
Lele28g0407 351 Gene3D - 65 282 - -
Lele28g0407 351 FunFam D2/4-type cyclin 77 190 - -
Lele28g0407 351 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Lele28g0407 351 Gene3D - 77 194 - -
Lele28g0407 351 FunFam D6-type cyclin 191 282 - -
Lele28g0407 351 SUPERFAMILY Cyclin-like 56 193 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0407 Lele-ChrLele28 2499642 2501534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0407 67 320 Core Cell Cycle Gene Families AT2G22490 49.434 1.33e-81 251