Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0405 ATGGGAAAAGAATTTGGAACCTGGATGCCGCAGCTGCATTTTGATTGGCAATCACCCAATTTGAGTTCCTTTGGCGCTAGCCTTGACGTGGGGAAGCGAAATGATTCTGCGTTTATGAGCGCTGGAATAAATATGATGCCCGAAAATTATACAATGCCACACTATGCACCCTCCATGCTACCTCATTCGCAGTTAGGACAGGCTAATGAACCTTATGGTTGGTCCTACGGTTTACCTCAGTTTCCACAGGCATTCATGCCTGCTTCGAACTTCACTTGGGAGAGTAAGCTCCCTTCGGGCCAGGAAAAAGGTATTAAGGAGGAAATTGCACCTGACAGGATACTGGGTTTCCCTAAGAAGCAGTTCATCGTTATTGACCAGACTGTCAATCAAACAAGATTCGTTTATAGTTCTGGGTTTGGAACTCCCATTGAGTGCCTTGCTTCTTGGCATTCAAAGCCGCATGGTCCTGACTATTTGAATGGGAATGAGCGTCCTTTTAGAAGGGATTTGAATAGTCTGAATGGACCCACTCTGACAGATAAAGTTGATAAAAATCAGGGAACTGAGGTCCAAAGTGAGATGCATGAAGACACAGAAGAAATCAATGCGCTACTTTACTCTGATAGTGAAGGTTACTCCACTGAGGATGATGAAATTACTAGCACAGGGCATTCGCCCAGTATAATGACCACTCATGATGACCAAGACTTCGTTTTGGGAAGCAATGAAGGAGTTGGTAGCTGCAATGAAGTATGTAGCTCTGCTGGGAAAACAAAGAAGCGGAAGCTGTCAGACGATAGAGCTTATGATGACCTACGGCTCATGGACAGTGCCAGTTCTCTGAATTTGAATATATCCTTAGATAATGGATATGATGCTGAATCAAGATGTTCTAGTGGCAGCAGTCAAGGATTAGACAACAAGAAGATGAGAAAAGAGAGGATAAGGGGTGTTCTAAATGTTCTGCAAACCATAATTCCTGGTGGGAAAGAAAGGGATCCAATTGGGCTTCTTGATGAAGCGATTAGTTGCCTGAAATCATTGAAACTCAAGGCTAGAGCTCTAGGACTCCACGACTTGAAGGGAGGGGGGAGGTGCTCAGCATATTATGGCGCAATAAAGGAAGTGTGA 1134 0.4436 MGKEFGTWMPQLHFDWQSPNLSSFGASLDVGKRNDSAFMSAGINMMPENYTMPHYAPSMLPHSQLGQANEPYGWSYGLPQFPQAFMPASNFTWESKLPSGQEKGIKEEIAPDRILGFPKKQFIVIDQTVNQTRFVYSSGFGTPIECLASWHSKPHGPDYLNGNERPFRRDLNSLNGPTLTDKVDKNQGTEVQSEMHEDTEEINALLYSDSEGYSTEDDEITSTGHSPSIMTTHDDQDFVLGSNEGVGSCNEVCSSAGKTKKRKLSDDRAYDDLRLMDSASSLNLNISLDNGYDAESRCSSGSSQGLDNKKMRKERIRGVLNVLQTIIPGGKERDPIGLLDEAISCLKSLKLKARALGLHDLKGGGRCSAYYGAIKEV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0405 377 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 300 349 IPR011598 GO:0046983
Lele28g0405 377 PANTHER TRANSCRIPTION FACTOR BHLH145 8 359 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0405 Lele-ChrLele28 2477292 2478693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0405 73 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 29.795 6.49e-22 93.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0396 25 2400807 2401886 Lele28g0405 28 2477292 2478693 hybridization
Lele26g0408 26 2474592 2475683 Lele28g0405 28 2477292 2478693 hybridization