Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0401 ATGGGCTTCTTCTCTTGCAATGCTGAATGTGCCGTCGCCACCTGTGATTCCCATTACTGGGACCTCAAGAAGAAGAATTATTCCAACAGAACCAGAAGAAGAACTCCTAAGCATAAGCTCGTTGAGATCAGGGAGTTTCAGTACTCGGAGCTCCTCGCCGCCACCGGTGCCTTCTCCTCCGACAGCTTCTTGGGCAAAGGCAGCCATGGCAGTGTCTACAAAGCTGCCCTCGACGACGGCAAGCTCATCGCCGCCGTCAAAAGAGCAAAGTTCTCCAAGCCTCAGGTCACAAACCTCCGCAACCACCCCACCAACTGTACCGGCTGTGCTAACTGTACGAGCCCGGCGGAGAACGAGATCGAGATTCTCTCTCGAGTTCGAAATCCACGCCGCTTCGTCAACCTCATTGGATTTTGCACCGACTCCGACGGCAATCAGTTAATTGTCGTTGAGTATATGCTCAACGGTTCCCTCTACGATGCCTTGCACTCCACCGCCAGACCGCCGGGCTGGAGCCGGCGGGTCTGGTTCGCTAGCCAGGTGGCAAAAGCTGTGCTGGCGCTTCACTCTTCGAATCCTCCGGTGATTCACCGGGACATAAAGTCGTCCAACGTTCTGATCGACGAGAAGGGGAAGGCGAGGCTGGGTGATTTCGGTCTGGCATTGAGAGGGCACGTAGAGGACGTCCGGGTGAAATGCACGCCACCTGCGGGGACGATGGGATACCTGGACCCATGCTACCTGGCGCCGGGGGATCTAAGCATGAAGAGCGACGTGTTCAGCTTCGGGATCTTGCTGCTGGAGATCATCAGCGGCAGGAACGCCATCGATTTGAATTACAGCCCGCCCTCCGTGGTAGACTGGGCGGTGCCGCTGATAAAGCGAGGGGAGTTCCTCGGACTCTGTGACCGGCGAATCGGGAAGCCATCGGACACGGCGATTATAAGGCATCTGGGGACGTTGGCGGCGAAGTGTGTGAGGTCGACGGCGGAGAAGAGGCCGTCGATGTCGGAGGCAGTGGAGTGGCTGGAACAAGTGAGGAAGAGGATTGAGGCGACGCCCATATGGAGGGGGCTGAGACGGAGGGAGGAGGAGAAAGCGGAATCGGGCGAGCGGAGTGATCAGGATGTGGGAAGAATAGTAAGAGGGGGAAGCAGAAGGAACCGGAAAGTGTCGAGCGTGGGTGGGGTGGAGGAAGAGAATGGGACGAGTGAAGCTTGCAATGGAGTGTCCAGGTCGAGATCAATGCCAAACGGCAATGTGAGCGGGATTGGGAGGAGGGTGAACAGATCGAGGGTCATGTCCATGGGGGGCTTTGCAGAGTTCACTTCACGTACGGAATTACACAGGACGGAAGAGGAAAAAACCCTTCCAAACCAGATAATTAACAACGAAGCAGGTTGGTAG 1407 0.5657 MGFFSCNAECAVATCDSHYWDLKKKNYSNRTRRRTPKHKLVEIREFQYSELLAATGAFSSDSFLGKGSHGSVYKAALDDGKLIAAVKRAKFSKPQVTNLRNHPTNCTGCANCTSPAENEIEILSRVRNPRRFVNLIGFCTDSDGNQLIVVEYMLNGSLYDALHSTARPPGWSRRVWFASQVAKAVLALHSSNPPVIHRDIKSSNVLIDEKGKARLGDFGLALRGHVEDVRVKCTPPAGTMGYLDPCYLAPGDLSMKSDVFSFGILLLEIISGRNAIDLNYSPPSVVDWAVPLIKRGEFLGLCDRRIGKPSDTAIIRHLGTLAAKCVRSTAEKRPSMSEAVEWLEQVRKRIEATPIWRGLRRREEEKAESGERSDQDVGRIVRGGSRRNRKVSSVGGVEEENGTSEACNGVSRSRSMPNGNVSGIGRRVNRSRVMSMGGFAEFTSRTELHRTEEEKTLPNQIINNEAGW 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0401 468 FunFam Serine/threonine-protein kinase-like protein 153 356 - -
Lele28g0401 468 PANTHER OS01G0253100 PROTEIN 32 349 IPR045271 -
Lele28g0401 468 Gene3D Phosphorylase Kinase; domain 1 28 152 - -
Lele28g0401 468 MobiDBLite consensus disorder prediction 361 425 - -
Lele28g0401 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Lele28g0401 468 SUPERFAMILY Protein kinase-like (PK-like) 42 354 IPR011009 -
Lele28g0401 468 ProSiteProfiles Protein kinase domain profile. 58 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0401 468 Pfam Protein kinase domain 60 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0401 468 Gene3D Transferase(Phosphotransferase) domain 1 153 357 - -
Lele28g0401 468 SMART serkin_6 58 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0401 468 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Lele28g0401 468 MobiDBLite consensus disorder prediction 361 383 - -
Lele28g0401 468 MobiDBLite consensus disorder prediction 404 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0401 Lele-ChrLele28 2456001 2457407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0401 44 354 Receptor kinase-like Gene Family AT3G59420 41.456 6.40e-66 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele28g0401 Pkinase 6.5e-34 CL0016