Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0393 ATGGCGGCCAACTCGCACAGAGGCGGTTCTCTCTACGGTGACGCGGCCCCTTACCGATCCAGACAAGGGCTTAGCACGAGACCGGTGGCTGGTTCCGATGAAATCCAATTGAGCATCGATCCGATGGACTTGGACGATGAGATCAGCGGTCTTCACGGGCAAGTTAGAAGGTTGCGACATGTTGCTGAGGAGATAGGAACAGAAGCGAGATATCAGAAAGACTTTTTGGAACAGCTGCAAATGACAATGATAAAGGCTCAAGCTGGGGTGAAGAATAATTTGAGAAGATTGAACAAGAGCATCATTCAAAACGGTTCAAATCATATTCTTCATAAAATGAGACTAAAGGGCTGCCCAGCATCCCGGATTAAAGAAATGCTAATTAAGAGCTTCCTTGGACCCTCACATGATGATGCTTGA 420 0.4714 MAANSHRGGSLYGDAAPYRSRQGLSTRPVAGSDEIQLSIDPMDLDDEISGLHGQVRRLRHVAEEIGTEARYQKDFLEQLQMTMIKAQAGVKNNLRRLNKSIIQNGSNHILHKMRLKGCPASRIKEMLIKSFLGPSHDDA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0393 139 CDD SNARE_Qc 43 99 - -
Lele28g0393 139 Gene3D - 43 100 - -
Lele28g0393 139 MobiDBLite consensus disorder prediction 1 32 - -
Lele28g0393 139 SUPERFAMILY SNARE fusion complex 42 99 - -
Lele28g0393 139 FunFam Bet1-like protein At4g14600 44 102 - -
Lele28g0393 139 PANTHER GOLGI SNARE BET1-RELATED 18 109 IPR039897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0393 Lele-ChrLele28 2413806 2415460 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0414 01 2421629 2423326 Lele28g0393 28 2413806 2415460 CCT
Lele02g0410 02 2383300 2384995 Lele28g0393 28 2413806 2415460 CCT
Lele03g0426 03 2425560 2427258 Lele28g0393 28 2413806 2415460 CCT
Lele04g0418 04 2478490 2480719 Lele28g0393 28 2413806 2415460 CCT
Lele25g0383 25 2331439 2333437 Lele28g0393 28 2413806 2415460 hybridization
Lele26g0399 26 2407595 2409186 Lele28g0393 28 2413806 2415460 hybridization