Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0369 ATGGATAAATTATGCTGTTTTAAGTCTTCCTACTCTCAGCTTGTAGTTTCACGTTCTTCATCAAGCACTGGGAAGGGGAAAAATAATGAAGGATCAATAAAGTATGGTTTTTGCCTAGTCAAAGGGAGAGCTGATCACCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATTCAGGGAAAAGAGTTAGGGTTGTTTGCCATTTATGATGGCCATTTAGGAGACCGCGTACCTGCCTACTTACAGAAACATCTGCTTGCCAATATCATAAAGGAGGACGAATTCTGGCAAGACCCCACTGGATCCATCTCAAAAGCTTATGAGCGAACAGATCAGGCAATTCTTGCAAATAGTTCCAATTTGGGGCGTGGTGGGTCAACTGCTGTAACTGCAATATTGATCAATGGCCAAAGGTTGTGGATAGCTAATGTTGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGTCATGCTGAGCAAATGACTATAGACCATGAGCCCAACACAGAACGAGGCAGCATTGAGAATAAAGGCGGTTTTGTCTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGACAGTTGGCTGTATCACGCGCATTTGGAGACAAGAGCCTCAAGTCACATTTGCGGTCAGACCCTGATGTACGGAATACTGCTATAAATTCTGATATTGATATTTTAATTCTGGCAAGTGATGGACTTTGGAAGGTTATGTCTAATCAAGAGGCCGTTGATATTGCAAGAAGGATGAAAGACCCACAGAAAGCAGCTAAGCATTTAACTGCTGAAGCATTGAAAAGAGACAGTAAAGATGATATATCTTGTGTTGTGGTTAGGTTTAGGTGA 849 0.4217 MDKLCCFKSSYSQLVVSRSSSSTGKGKNNEGSIKYGFCLVKGRADHPMEDYHVAKFVQIQGKELGLFAIYDGHLGDRVPAYLQKHLLANIIKEDEFWQDPTGSISKAYERTDQAILANSSNLGRGGSTAVTAILINGQRLWIANVGDSRAVLSRKGHAEQMTIDHEPNTERGSIENKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVRNTAINSDIDILILASDGLWKVMSNQEAVDIARRMKDPQKAAKHLTAEALKRDSKDDISCVVVRFR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0369 282 SUPERFAMILY PP2C-like 32 281 IPR036457 -
Lele28g0369 282 CDD PP2Cc 33 281 IPR001932 -
Lele28g0369 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Lele28g0369 282 SMART PP2C_SIG_2 45 281 IPR001932 -
Lele28g0369 282 FunFam Probable protein phosphatase 2C 39 25 282 - -
Lele28g0369 282 Gene3D - 29 282 IPR036457 -
Lele28g0369 282 SMART PP2C_4 26 279 IPR001932 -
Lele28g0369 282 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Lele28g0369 282 PANTHER PROTEIN PHOSPHATASE 27 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0369 Lele-ChrLele28 2255855 2258915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0369 1 282 PP2C-type Phosphatase Gene Family AT1G22280 71.875 9.39e-151 421