Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0360 ATGAAATATGGGTCAATTAATGAATCCTCTTGTGGGCCAGATGTTATCCGCAACGTCTCCCTTGCGCAGTTGGTCTCTAAAACCCTAGCGAAGTCGGGCGCAATCGCTGCCCCTCTCCCACTCCACGTTTCAGCACCAAATATGTCGCACTTTGGAAGATCCGGTCCTCCAGACATCAGAGACACATATTCCCTTCTCGTCCTCAATATTACTTTCCGAACCACCGCTGACGATCTCTACCCCCTTTTTGACAAGTACGGCAAGGTTGTCGATGTCTTCATCCCCAGAGACCGAAGGACTGGCGAATCACGAGGCTTCGCTTTTGTTCGGTATAAGTATGCCGACGAGGCTCAGAAGGCAGTAGATAAGCTTGATGGAAGAGTGGTCGATGGAAGAGAAATTATGGTTCAATTCGCAAAATACGGACCTAATGCTGAGAAAATCCGCAAGGGCAGGATTGTAGAAACATCCTCCAAGCCAAGAGGGAGATCAAGAAGCCGCAGCCCTCGTCCTAGGCATAGGGATGAATATAGAGACAGGGACTACAGGAGAAGAAGTCGCAGTAGAAGTAGGGAAAGATATGATCGTGACAAGTACCGTGAAAGGGATAGGGATTATCGTCGCCGGAGTAGGAGCCGCAGTGCAAGTCCTGATCGGCATAAAGATAGTAGGAGAGGAAGAGATGATGAGGAGAGAAGAACTCGAAGCATATCAGTGGATAGTGCATCACCTGCTCGGCATGGCTCCAGTCCTCATAGAAGTCCATCTCCACGCAGGAGGTCATCTCGAGATGAGCGGCATGATGAACAGAATAGTCATGAGCAATCACCTGCTCAGAAAGATGTTTCACCACATGATCGTCCTATTGATTCTCGAAGCCCATCTCATAAATCTGATGCTGATGAATGA 909 0.4873 MKYGSINESSCGPDVIRNVSLAQLVSKTLAKSGAIAAPLPLHVSAPNMSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYADEAQKAVDKLDGRVVDGREIMVQFAKYGPNAEKIRKGRIVETSSKPRGRSRSRSPRPRHRDEYRDRDYRRRSRSRSRERYDRDKYRERDRDYRRRSRSRSASPDRHKDSRRGRDDEERRTRSISVDSASPARHGSSPHRSPSPRRRSSRDERHDEQNSHEQSPAQKDVSPHDRPIDSRSPSHKSDADE 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0360 302 MobiDBLite consensus disorder prediction 149 302 - -
Lele28g0360 302 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 65 134 IPR000504 GO:0003723
Lele28g0360 302 Gene3D - 45 152 IPR012677 -
Lele28g0360 302 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 63 141 IPR000504 GO:0003723
Lele28g0360 302 MobiDBLite consensus disorder prediction 169 237 - -
Lele28g0360 302 MobiDBLite consensus disorder prediction 257 302 - -
Lele28g0360 302 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 61 283 - -
Lele28g0360 302 FunFam Serine/arginine-rich splicing factor SC35 51 150 - -
Lele28g0360 302 SUPERFAMILY RNA-binding domain, RBD 47 150 IPR035979 GO:0003676
Lele28g0360 302 SMART rrm1_1 64 137 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0360 Lele-ChrLele28 2199249 2201632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0360 61 139 Eukaryotic Initiation Factors Gene Family AT3G11400 37.975 3.37e-10 58.2