Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0346 ATGTTGTTGGGGAAAAGACCTCGTCCTCCAATGAAGAGGACCACAAGCCTGTCAGAAATCGGCGTGGATCTCAGCACCACCACCGATCCCAACCGGCAGATTGCCGGTGGGTTCAGTAATGGGCCCGATCAGAGGGCAGTGGTGGCCGCCAGTACTCTCTCGCAGACGACCCATAGAAGGCACTCCGCCGACTTCACTCACACCCCTGACTTCTTGCGCTCTTGCTGTCTCTGCAAACGCCCCCTGGTACCCACCCGTGACATCTACATGTACAGGGGGGATAGCGCTTTCTGCAGCGTAGAATGCCGTCAACATGCGATGAATCGGGACGAGAGGAAGGAGAAGTGCTCGTTGGCGTCAAAGAGAAAGATTGCGGCCCCTCATCATTCCACCGGATCCAAAGTCACCTCTAATGGCGAAACCGTGGGCGCCTTATTTGCGAGCATGAAATTCACCGCTACAGTTAATGGGAATGAATTCTCAAGAGTGGGTGGCAACGAAAGATGCAGGACGGAGAATGCGAGAGAGAGAGAGAGAGAGAGAACGCAGAATTCAGAAGCCAGTGGTGTGGCCGCCGAGAATAATGGAGCCACAGATGGATGA 603 0.5473 MLLGKRPRPPMKRTTSLSEIGVDLSTTTDPNRQIAGGFSNGPDQRAVVAASTLSQTTHRRHSADFTHTPDFLRSCCLCKRPLVPTRDIYMYRGDSAFCSVECRQHAMNRDERKEKCSLASKRKIAAPHHSTGSKVTSNGETVGALFASMKFTATVNGNEFSRVGGNERCRTENARERERERTQNSEASGVAAENNGATDG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0346 200 PANTHER FCS-LIKE ZINC FINGER 5 1 134 - -
Lele28g0346 200 MobiDBLite consensus disorder prediction 162 200 - -
Lele28g0346 200 Pfam zinc-finger of the FCS-type, C2-C2 64 113 IPR007650 -
Lele28g0346 200 ProSiteProfiles Zinc finger FLZ-type profile. 70 114 IPR007650 -
Lele28g0346 200 MobiDBLite consensus disorder prediction 165 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0346 Lele-ChrLele28 2105859 2108724 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0346 28 2105859 2108724 Lele01g0376 01 2193214 2194296 CCT
Lele28g0346 28 2105859 2108724 Lele02g0373 02 2165962 2168222 CCT
Lele28g0346 28 2105859 2108724 Lele03g0383 03 2215061 2216146 CCT
Lele28g0346 28 2105859 2108724 Lele04g0380 04 2263366 2264442 CCT
Lele25g0331 25 2000903 2006905 Lele28g0346 28 2105859 2108724 hybridization
Lele26g0347 26 2090172 2090805 Lele28g0346 28 2105859 2108724 hybridization