Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0319 ATGGCTAAAGTAGGCAAGTTGCAAAGGAAGTCCCATTCTCAACGTCAGAGGGCAACTCCATATCAATTAACATCTCACTCCAAGAAGAATTTGAAAGATGATGAGAGCTTTTATAAAGCATCGGAGAAGCAAGACTGGGAAGATGTAACCTGCTCCGTCTGTATGGAGGTCCCCCACAACGCAGTCCTTCTCCTTTGTTCATCTTATAACAATGGTTGTCGCCCTTATATGTGTGCTACAAGTCATCGCTTTTCAAATTGTTTTGAGCAATACAAAAAGGCCTATACTAAAGCAACTGTTCAAAGTTTGCCACTGGCGACAAATAATGCCAATCTGAATGCAGGTGAAAGCAGTGACAATGCAGAGGTGCCAGAGCTCCTTTGCCCTCTTTGTCGTAGGCAGGTAAAGGGTTGGACTGTTGTTGAACAGGCACGGAAGTATTTGAATGGGAAGAAAAGAGGCTGCATGCAGGATGAGTGCTCTTTTGCGGGCACTTACAAGGAGCTTAGGAAGCATGTTAGGTCTGAGCATCCATATGCACGACCACGAGATGTGGACCCTATACGAAAAGATAAATGGAAGAGGCTCGAGTATGAGAGGGAACGAAATGATGTGATCAGCACAATTTTATCATCTACTCCTGGGGCTATGGTTCTAGGAGATTACGTGCTTGAACCAAATGACCACGCCTTCTATAGCGATTCTGATTCTGAATCTGAGGAGGACTATGAGGATGATGATTTCTTCTCCATGAGGTCGATTGGTTTAGGAAGAAATAGGTCTTTTTTGTCAAGTATTGGTTATGGTCGGGGCTTTGAATATGATTCATTGGATATGGATCATTTTGAATTGAATCGTGTTGCTCCTACAGGTTCGACTGCTGCCTCCAGGCGTGGACTCCACAGGATACTCTTAGGAGGAAGGTCAAGAAGAAGGCGAAGGCATAGGCTGCCTAATGCAAGTAGGATGTTGCAGTGTCATGATTATCATCATTTGAAGTTTTTTGAACAGACTGAAGAAGGCAATTTTCAGGGTTCTTATTGCCTCTTGGTTAGGGGTCCACCCAAAGTTCCCCAGTGGAGGGCTCATGTCTTGGACTCACTTCCTATCACCTCTATTGTGGAAGTGAAGGGTCCACTGGGCCACGTTGAGTACACTGGAAGAGGTCATTTTTTGGTTCATGGGAAGGCCAAGTTTGCCAAGAGGCTAGCCATGTTGGCCGGTGGCACGGGGATCGCGCCCATTTATCAAGTGACGCAAGCCATTCTGAAGGACCCCGAGGACAGAACCGAGATGCACGTTGTGTATGCAAACCGAACGGAGGATGATATATTGTTGAGAGAAGAGCTGGATGAGTGGGCTAAGAAAGATGAACGGTTCAAGGCGTGGTACGTGGTGCAAGAGAGCAAGAGGGAAGGGTGGGAATATAGTGTGGGTTTCGTGATAGAGGATATCCTGAGGGAGCATGCCCCCGAGGCATCAGAAGAGACGCTGGCATTGGCCTGTGGGCCACCACCCATGATTCAGTTAGCCGTTCGGCCTAATTTGGAGAAAATGGGGCATGACATCAACAACGATTTGCTCGTGTTTTAG 1593 0.4677 MAKVGKLQRKSHSQRQRATPYQLTSHSKKNLKDDESFYKASEKQDWEDVTCSVCMEVPHNAVLLLCSSYNNGCRPYMCATSHRFSNCFEQYKKAYTKATVQSLPLATNNANLNAGESSDNAEVPELLCPLCRRQVKGWTVVEQARKYLNGKKRGCMQDECSFAGTYKELRKHVRSEHPYARPRDVDPIRKDKWKRLEYERERNDVISTILSSTPGAMVLGDYVLEPNDHAFYSDSDSESEEDYEDDDFFSMRSIGLGRNRSFLSSIGYGRGFEYDSLDMDHFELNRVAPTGSTAASRRGLHRILLGGRSRRRRRHRLPNASRMLQCHDYHHLKFFEQTEEGNFQGSYCLLVRGPPKVPQWRAHVLDSLPITSIVEVKGPLGHVEYTGRGHFLVHGKAKFAKRLAMLAGGTGIAPIYQVTQAILKDPEDRTEMHVVYANRTEDDILLREELDEWAKKDERFKAWYVVQESKREGWEYSVGFVIEDILREHAPEASEETLALACGPPPMIQLAVRPNLEKMGHDINNDLLVF 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0319 530 FunFam Nitrate reductase [NADH] 381 530 - -
Lele28g0319 530 PRINTS Cytochrome B5 reductase signature 404 423 - -
Lele28g0319 530 PRINTS Cytochrome B5 reductase signature 498 506 - -
Lele28g0319 530 PRINTS Cytochrome B5 reductase signature 442 453 - -
Lele28g0319 530 PRINTS Cytochrome B5 reductase signature 371 385 - -
Lele28g0319 530 Gene3D - 381 530 IPR039261 -
Lele28g0319 530 MobiDBLite consensus disorder prediction 1 28 - -
Lele28g0319 530 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 430 439 IPR001709 GO:0016491
Lele28g0319 530 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 474 490 IPR001709 GO:0016491
Lele28g0319 530 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 498 506 IPR001709 GO:0016491
Lele28g0319 530 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 404 423 IPR001709 GO:0016491
Lele28g0319 530 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 442 453 IPR001709 GO:0016491
Lele28g0319 530 CDD cyt_b5_reduct_like 344 525 - -
Lele28g0319 530 Pfam Protein of unknown function (DUF1644) 47 207 IPR012866 -
Lele28g0319 530 PANTHER OS01G0612600 PROTEIN 8 256 - -
Lele28g0319 530 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 181 IPR013083 -
Lele28g0319 530 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 373 524 IPR039261 -
Lele28g0319 530 Pfam Oxidoreductase NAD-binding domain 405 511 IPR001433 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0319 Lele-ChrLele28 1922031 1925872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0319 358 521 NADPH P450 reductases AT5G17770 40.361 2.83e-30 117