Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0313 ATGAGCAAACCCAGAATCCATAGGAAACCCACCAAGCAAGCCATTGCCGACCAGAACCAAAAGCCGCAGAAATCAGAGAAACAGCCCTCTTGGGCAGTGGTGAGAGGCCTATTGACTTGTAGAAATGTTCAAACCCAGCCGCAGCAAATTCCTGAAGGGAAACAACAACCAAAGAAGAAACAAGAACAGCGAAAGTTGCAGGAGGAAAGAGTCCCAGAAGATCAGAACGGCAAGAAATGCAAGAAGATGAAATGTTCAGGCTCGCTTTGTAATAACACCAATATTATGGCAAAGCCTGAAACGGGATGCCCTGATGCGCACGGCAAAAAGGCCTCACTGTCTGCATGTAGCAGGAGCAACAATGATTCTTCAAGCAGATCCATGAGAGCTCCTCCACGAGAACCCAACGCTGCCGTTTTAGTATCTTCTTCTTCATTGTCAGCGTCTTCTAGTTCTTCTGTTAGCGGGTCTTTCAAGGGAATGCACTTCAGGAGACTCTCTGGTTGTTATGAGTGCCGAATGGTGGTTGACCCTGTTCTGGGTTTCACCAGAGACCCTTCCCTTCGGAGCAGCATTTGTCCATGCCCAGACTGTGGTGAGATCTTCACGAAAGCTGAAAGCCTGGAGCTTCATCAGGCGGTTAAACATGCAGTATCGGAACTGGGCCCCGAAGATACAAGCAAGAATATAGTAGAAATCATATTCCATTCAAGCTGGCTGAAGAAACAGTCCCCAGTCTGCAAAATAGATCGCATCCTCAAAGTCCATAACACCCAGAAGACGATTTCCAGATTCGAAGAATACAGAGACTCCATAAAAGCCAAAGCCAGAAACTTCCCCAAGAAACACCCACGTTGCATAGCAGACGGCAACGAGCTGCTCAGGTTTCACTCCACCCCCTTCGTCTGCTCTCTGGGCCTCAACGGTTTGGCCAACCTCTGCAACTCAATACCGCAGTGCAACGTTTGCAACATAATCAAGAACGGGTTTGAGTTGGCCGCTGAAACGAACGGAGGAAACGACGGAAAGGGAATATTGACGACGGCGACGAGCGGGAAGGCCCACGACAAAGCGGTGGTTTCAGCGGACGACAAAAACGACACAAGGGCGATGCTGGTTTGTCGGGTAATAGCTGGCAGGGTGAAGAAGAACATGGAAGGAAGCATGGAGGAATATGATTCGATGGGAGGGGGTGTTGGGGCGTATTCTAATTTGGACGAGTTATATGTGTTCAATCCAAGAGCTATATTGCCTTGTTTTGTGGTGATCTACAGAGTACCAACTGATGCCTTTACACTATCCGCAGAGGCTGATTCTTTTGTTGGGCTGGACTTCAGCTGTGAGGTTGAGACTGTGATTGCTGGTAACTACCTAGAAATGGAGGAAGAAGGTGGTGATTCCATGTCAGCCAGGAGCATAATATCTAAGCTATTTTGGCAGGGGGTTTCTGTGTATGATGCATGCTTTAGCTGTGCTTCTAATCAGCTGTTTTATGGACTCATGGGAAGCTGGCCGTCTTACCTTATTAGTGTTCTTTATGTTGAGTACAGAACCAGAAAGGAGAGAGAGAAGGTTGATTTCAGAAAACGTGTAATTCAGGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTCAAGCCGATATATCTGGTGGCAACACTATATGTGCTGACCCTGACTTTGCCATCAGCAGCTGCAGGTTCATAACCTTTGGAGTTGCTTGTACTCCTCTGTATTTTGTGTGGAAGAAGTTTATTGGAGTACACGAAACCAAGAGCTTGGTGAAGAGGGCAATGGCTAGAGTTCCCGTTGAGATTCCAATATGGTTTAAACTTAAGGCCCGGTCCCCTCCACAAGTGGAGAATTCAATAGCAGAGGCATTGGACAGTGTCATGGAGCATTCTGAAGACTGCGGCAAAGCTAAGAATTCACTGAAATGA 1941 0.473 MSKPRIHRKPTKQAIADQNQKPQKSEKQPSWAVVRGLLTCRNVQTQPQQIPEGKQQPKKKQEQRKLQEERVPEDQNGKKCKKMKCSGSLCNNTNIMAKPETGCPDAHGKKASLSACSRSNNDSSSRSMRAPPREPNAAVLVSSSSLSASSSSSVSGSFKGMHFRRLSGCYECRMVVDPVLGFTRDPSLRSSICPCPDCGEIFTKAESLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTISRFEEYRDSIKAKARNFPKKHPRCIADGNELLRFHSTPFVCSLGLNGLANLCNSIPQCNVCNIIKNGFELAAETNGGNDGKGILTTATSGKAHDKAVVSADDKNDTRAMLVCRVIAGRVKKNMEGSMEEYDSMGGGVGAYSNLDELYVFNPRAILPCFVVIYRVPTDAFTLSAEADSFVGLDFSCEVETVIAGNYLEMEEEGGDSMSARSIISKLFWQGVSVYDACFSCASNQLFYGLMGSWPSYLISVLYVEYRTRKEREKVDFRKRVIQGNYACNVEATEVQADISGGNTICADPDFAISSCRFITFGVACTPLYFVWKKFIGVHETKSLVKRAMARVPVEIPIWFKLKARSPPQVENSIAEALDSVMEHSEDCGKAKNSLK 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0313 646 MobiDBLite consensus disorder prediction 43 82 - -
Lele28g0313 646 MobiDBLite consensus disorder prediction 1 30 - -
Lele28g0313 646 ProSiteProfiles Zinc finger C2H2 type domain profile. 193 221 IPR013087 -
Lele28g0313 646 Gene3D - 217 426 - -
Lele28g0313 646 MobiDBLite consensus disorder prediction 55 81 - -
Lele28g0313 646 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 82 424 - -
Lele28g0313 646 MobiDBLite consensus disorder prediction 113 130 - -
Lele28g0313 646 SUPERFAMILY ADP-ribosylation 218 430 - -
Lele28g0313 646 ProSitePatterns Zinc finger C2H2 type domain signature. 193 216 IPR013087 -
Lele28g0313 646 MobiDBLite consensus disorder prediction 13 27 - -
Lele28g0313 646 MobiDBLite consensus disorder prediction 107 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0313 Lele-ChrLele28 1848329 1859251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0313 158 426 C2H2 Transcription Factor Family AT1G75710 53.401 1.09e-96 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele28g0313 None None None