Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0309 ATGCACACGTATCTAGTGATGCAAAAGTTTTCTCGGAATCCATCAATCCAAACTTCACCGCTTCATATCTTCAATTCATTGAGCGCCCTAGCACCTTCTTCTCATCCCGCAATGGAACATTCGAGGCTGCCATATTCAATCCTGGAGATCAACAATCCAGATTCTACCTGTGCATCATACATGCGGCATCCCGCACCATCATTTGGTCGGCTAATCGTGATGCTCCCATAGTTTCAGCACCCAACAGACACAATTGTCATCGGACAACGCTTACCTGTTGGGACATGGCTGTCAAGTATGATATCAGGGTCTGACTTGTCAACTGGGGATTACAACTTGAGAATCACCCCGTCTGATGTAATAATTGAGTGGGACGAACAGACATACTGGAGGTTATTAGGATTATGCACTCATGGCACTGCTTCCTCGCTACCTACCTGTTCTTGTCCCCCAAACTTCCATGCAGGCTCACGTAATGTTTTCGGGGTTGTGTGCCTTGCAATGTACTTTGGCAATACATACTCTAACAGCGTCACATATGCAGTGAACTTGACTATTTGCCAAGATCTCTGTACATGGAATTGTTCTTGCTTGGGATTTTTCTATGAAAATTCGTCTGGTTCCTGCTATATGCTTGAAAATGAGTTGGGTTCTGTTATGTCAAGTAGTGGAGGTGCAAGTAGCTCGTTGGGCTACATAAAAGTTTTTGTCGCATCTGCTACTGATACTGATGATCCTACTTCTGAAGAAGATGGGCTTCCTGTGGCTGCTCTGGTGCTAATACCTCTTACTGGATTCATTATTGCTTTGGCACTCGGTTTCCTGTGGCTTAGAAGATTTAGAATCTCCAGGACAAAAAGAGATAAAATTAGGCAAGTTCAAATCACATTCTTCAGAGGACATGGAGGCCTTCTATATTCCAGGGTGTTCAAGGGACAACTGCCTGATAAGACCGTCGTGGCCGTAAAGAAAATAGTAAACGTGGGAAATCAAGGGGAAAAGGATTTCTGCACTGAGATTGCAATCATTGGAAATATTCACCACGTTAATTTGGTGAAACTGAAAGGCTTCTGCACTGAAGGAAGACGACGTTTGTGGATTTATGAGTACATGAATCGTGGCTCCCTGGATCGTACCGTCTTTGGCGGCTGA 1152 0.4436 MHTYLVMQKFSRNPSIQTSPLHIFNSLSALAPSSHPAMEHSRLPYSILEINNPDSTCASYMRHPAPSFGRLIVMLPXFQHPTDTIVIGQRLPVGTWLSSMISGSDLSTGDYNLRITPSDVIIEWDEQTYWRLLGLCTHGTASSLPTCSCPPNFHAGSRNVFGVVCLAMYFGNTYSNSVTYAVNLTICQDLCTWNCSCLGFFYENSSGSCYMLENELGSVMSSSGGASSSLGYIKVFVASATDTDDPTSEEDGLPVAALVLIPLTGFIIALALGFLWLRRFRISRTKRDKIRQVQITFFRGHGGLLYSRVFKGQLPDKTVVAVKKIVNVGNQGEKDFCTEIAIIGNIHHVNLVKLKGFCTEGRRRLWIYEYMNRGSLDRTVFGG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0309 383 ProSiteProfiles Protein kinase domain profile. 295 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0309 383 Pfam Protein tyrosine and serine/threonine kinase 306 378 IPR001245 GO:0004672|GO:0006468
Lele28g0309 383 Gene3D Phosphorylase Kinase; domain 1 300 372 - -
Lele28g0309 383 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 135 381 - -
Lele28g0309 383 ProSiteProfiles PAN/Apple domain profile. 149 237 IPR003609 -
Lele28g0309 383 SUPERFAMILY Protein kinase-like (PK-like) 306 380 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0309 Lele-ChrLele28 1835049 1838058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0309 232 382 Receptor kinase-like Gene Family AT1G53420 31.792 1.12e-18 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele28g0309 PK_Tyr_Ser-Thr 6.9e-10 CL0016