Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0298 ATGGGCGAAGTGGTTAGAGATCAAGAGAGTACTATGGGAGAGACGAAGAGAATAGGGAAGTTGAGCAAAGCCAAGCCATATCTGCTAATGGTTGGCCTCCAATTTGGGATGGCAGGCAACTACATATTCGGAAAGGACATTCTCGACCGCGGCATGAGTCGTTTCGTCTTCATTGTCTACCGCAATTCCATGGCTGCCTTCTCCCTCGCTCCTTTTGCTTTCTTCCTTGAAAGGAGAAGAAGGCCGAAGATGACGGTCCCAGTTTGTCTGCAGATAATGGCGCTGGGATTTCTCGAGCCGGTATTCAACCAAAGCTTCACTTACTTGGGGATGAAATACACATCGGCTTCGTTCGCTTCTGCTATAGTGAATGCCGTGCCCTCCTTCACGTTTCTGCTGGCAGTCATTTTCCGGATAGAGAGGATAAAAGTGAAGGAGATAAGGAGTGTGGCGAAAGTGATAGGGACAATGGTGACGCTGGGAGGGGCGCTGGTGATGGCAACCTATAAAGGACCAGGATTCAGTTTATTCAGCTCCGCCACCAAATTGCAAGACACTAAGCCTAGCCACGGTAACAGCCAGGCGAGTGGGGCTCTCTACATACTAATGGGGTGCGGGGCATTGTCGGGTTTCTACGTATTGCAGTCCGTGACGGTGAAGAGATACCCGGCGGAGCTGTCGCTGGCCACACTCATATGCATGGCGGGAGCTTTGCAGGCCACGGCGGTGGCGCTAGTGGCGGAGCCTCACTCTCGATCCTGGGCCATTGGTTTGGACTACCGTCTCTATGCCCCTCTCTACACGGGGATAGTGAGTTCAGGAATAGCATATTATGTGCAAGGCGTGGTCATGAATCTGAGAGGTCCTGTGTTCGCTACCGCCTTCAATCCTCTCTGCATGATCATCGTTGCCGCTCTCGGCTCCCTCCTCCTCCACGAGCAACTCCATCTCGGAAGTATCATAGGAGCCATCATCATCGCTCTGGGCCTTTACTCCGTCGTCTGGGGTAAAGCCAAGGATTCATCATCCCCCCAGAAACCACCAAATTCTGCTGCTGGAACTCTTCAGGATCATGAAGATCTTAAGCTCGACGTTACTACCGACAGCATGGATCAACTCCAGCTTGATCTGCAGTTATCTAAAATGGAAGCTCAACAAGCAAACGCCAAGCTCTCAACTGTCTAA 1185 0.5165 MGEVVRDQESTMGETKRIGKLSKAKPYLLMVGLQFGMAGNYIFGKDILDRGMSRFVFIVYRNSMAAFSLAPFAFFLERRRRPKMTVPVCLQIMALGFLEPVFNQSFTYLGMKYTSASFASAIVNAVPSFTFLLAVIFRIERIKVKEIRSVAKVIGTMVTLGGALVMATYKGPGFSLFSSATKLQDTKPSHGNSQASGALYILMGCGALSGFYVLQSVTVKRYPAELSLATLICMAGALQATAVALVAEPHSRSWAIGLDYRLYAPLYTGIVSSGIAYYVQGVVMNLRGPVFATAFNPLCMIIVAALGSLLLHEQLHLGSIIGAIIIALGLYSVVWGKAKDSSSPQKPPNSAAGTLQDHEDLKLDVTTDSMDQLQLDLQLSKMEAQQANAKLSTV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0298 394 Coils Coil 370 390 - -
Lele28g0298 394 PANTHER WAT1-RELATED PROTEIN 25 344 IPR030184 GO:0016020|GO:0022857
Lele28g0298 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 170 - -
Lele28g0298 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 338 - -
Lele28g0298 394 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020
Lele28g0298 394 Pfam EamA-like transporter family 26 166 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0298 Lele-ChrLele28 1765881 1768220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0298 12 394 Nodulin-like Gene Family AT2G37460 43.636 5.16e-115 338