Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0293 ATGCCGTTTACTACTGCAACGGGTAAAGAGGCTTATTCTGAATTCTCAATTGTAGAACCTCTTTCCTCTGTAGATGTTAAGGCCGCTGCTTACACTCAGAGCCACAAATATACAGAATCAATCCAAGACACTCTTAAGTCTATTGAGATTGACCCGAACTATAGCAAGGCATACAGTCGACTGGGTTTAGCATATTATGCTCAGGGAAATTACAGAGATGCCATTGATAAAGGGTTTAGGAAAGCCTTGCTTTCGGATCCGATTAATGAGTCGATTAAAGAAAATATACTGGTTACTGAGCAAAAATTGATAGAAGAGCAACACCGTGCAGATCACAGTCAGAAGATTATAGCCATTTTTAATGGTGGCAGCCTATGCGTAGAGCTAACCGTTTTACCTCAGAATTCAAGATCATCTCAGGAGTCTCAGAACCAGTCCGCACGAGGGTCAAGAGGAAATGCAGCTCCACCGCCATTCAACTCAATGTCATTTAATGCCAACGATCTTGCAAGCATGTTTATGAACAGAGCCGCAAACACTGCCAATGCCCATCAGGGACAGCATCCCCAGGAACCGCAAGGAGAAGATAGCAATACCAATCCATCTAATGAACCTGAAATAAGAATCGGGAGCAATATCAATTTAAACTTGAACCAAATGCCTGAGGATTTGACGGGGGCTTTCAGGAACAAGAAAGAAAGAAATGATTTTGACGGAAATCGTAGCTGTTTGGAGAGTTTGCATTGGACTGGCGAGGAGCTCAGCCCCCGTGTAAAGAATGGGGAATGATCAATGTTGGGGCCCCAACTGTGTTTTGTGATGCGATTGCTAGTTATTACAGTTGGAGGTGGAGGTTGGAGGTTGGAGGTGGAGGTGGAAACTGAAGTTGGTATATTACAGAGTGGTCATTCCGTCCTGGAAATGAGTGCTTACATTGTTGGTGTCCTTCTTCCTCTTTTGGTTACTATACTATTCCGGAACTCCAAGAATGGGAAAAGACGTGGTGTCCCCGCCGATGTTGGTGGTGAACCTGGGTTTGCAATTCGGAATCATCGGTTTCCTTCCCCGGTCAGTTCGGCCTGGGAAGGTGTAAAGACTCTTGCAGAACTTTTTGAGCTCGCTTGTAAGCAGCATCGAGATAGATTTTTGCTTGGGACCCGAAAATTGATCTCGAGGGAGGTTGAAATAACTGAAGATGGAAGATCTTTTGAGAAGCTGTCATTGGGAGACTATGAATGGTTGACGTATGGGAAAACATTCGAGGCTGTCTGTAACTTCGCCTCTGGTCTTACAAAGATTGGGCATGTAAAAGAAGAACGAGCCGCAATCTTTGCTGACACAAGAGAAGAATGGTTTATTGCGCTACAGGGTTGCTTTAGGCGCAATATTACCGTTGTTACTATATATGCATCACTGGGAGATGAAGCTTTATGTCACTCGTTAAATGAGACAGAGGTGACGACAGTAATTTGTGCGCAAAAAGAATTGAGGAAATTGGTACACATAAGTGGACAACTTGACACAGTTAAACGTGTGATATGCATGGATGATGATATCCCCTCTGACACATCAGCTTCTGAGCATGGCTGGACAATCACTTCCTTTCCCAATGTTGAGAGACTAGGTAGAGAAAATCCAGTTGATGCTGATTTACCTCTTCCGGCAGATGTTGCAGTTATAATGTACACAAGTGGAAGTACCGGATTGCCCAAGGGAGTGATGATGACACACGGTAATGTCTTGGCAACAGTCTCTGCTGTCATGACAATTGTTCCTTACCTTGGTAATAAGGACATTTACCTAGCATACTTACCAATGGCTCATATTCTTGAATTAGCCGCGGAGAATTTGATTGCAGCTGTTGGAAGTGCCATAGGATATGGATCTCCTTTGACTCTAACTGATACATCAAGCAAGATAAAAAGGGGAACAAAGGGGGATGCCACTGTACTGATGCCAACTTTAATGGCAGCTGTACCAGCAATTCTTGATCGTGTTCGCGATGGAGTGCTTAAGAAGGTAAATGCAGCAGGAGGATTATCCAAGAAATTGTTTGATTTAGCCTACTCACGCAGGTTGAATGCAATTAATGGTAGCTGGTTTGGAGCTTGGGGCTTGGAAAAAGCTCTCTGGGATGCTTTAGTGTTCAAAAAGGTCAGAGCAATCCTGGGCGGGCGTATCCGTTTTATACTGTCTGGTGGGGCTCCCCTTTCTAGTGATACTCAAAGATTCATCAATATTTGTCTTGGTGCTCCGATTGGTCAAGGATATGGTCTCACAGAAACCTGTGCTGGTGGAACATTCTCCGATTTTGATGATACATCAGTTGGTCGTGTGGGACCACCTCTTCCTTGCTCATTTATCAAGCTAATCAATTGGCCCGAAGGTGGTTATTTGATTGATGATTTACCAATGCCCCGTGGTGAAATTGTGATTGGCGGTCCAAATGTTACTCTTGGATACTACAAAAATGAAGAAAAGACAAGAGAGTCTTACAAGGCTGATGATAGAGGAATGAGATGGTTCTACACTGGTGACATAGGGAGGTTCCATCCAGACGGTTGCCTGGAGATTATTGATCGTAAAAAGGACATAATTAAACTCCAGCATGGTGAATATGTCTCCCTGGGAAAGGTTGAGGCGGCTCTTAGTGTCAGCCCCTATGTAGACAGTATTATGTTGTATGCTGATCCTTTTCATAGTTACTGTGTGGCACTTGTTGTGCCTTCTCAGTCTGCAACGGAAGAATGGGCTTCAAGGCAAGGCATTGCTTATTCTGATTTCTCAGAATTGTGCAGGAAAGAAGAAACTGTTCAGGAAGTAAAAGCGTCCCTTGTAAAGGAAGCAAAGAAGGCTCGCTTGGAGAAATTTGAGATTCCCGGAAAAATTATGCTGCTTTCTGACCCTTGGACTCCCGAATCTGGCCTAGTGACTGCAGCTCTCAAGATCAAAAGAGAAGCCATCAGAAGAGCCTTCGCTGAGGAACTGGAGAAGTTATATTCTTCATAA 3009 0.44 MPFTTATGKEAYSEFSIVEPLSSVDVKAAAYTQSHKYTESIQDTLKSIEIDPNYSKAYSRLGLAYYAQGNYRDAIDKGFRKALLSDPINESIKENILVTEQKLIEEQHRADHSQKIIAIFNGGSLCVELTVLPQNSRSSQESQNQSARGSRGNAAPPPFNSMSFNANDLASMFMNRAANTANAHQGQHPQEPQGEDSNTNPSNEPEIRIGSNINLNLNQMPEDLTGAFRNKKERNDFDGNRSCLESLHWTGEELSPRVKNGEXSMLGPQLCFVMRLLVITVGGGGWRLEVEVETEVGILQSGHSVLEMSAYIVGVLLPLLVTILFRNSKNGKRRGVPADVGGEPGFAIRNHRFPSPVSSAWEGVKTLAELFELACKQHRDRFLLGTRKLISREVEITEDGRSFEKLSLGDYEWLTYGKTFEAVCNFASGLTKIGHVKEERAAIFADTREEWFIALQGCFRRNITVVTIYASLGDEALCHSLNETEVTTVICAQKELRKLVHISGQLDTVKRVICMDDDIPSDTSASEHGWTITSFPNVERLGRENPVDADLPLPADVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMTIVPYLGNKDIYLAYLPMAHILELAAENLIAAVGSAIGYGSPLTLTDTSSKIKRGTKGDATVLMPTLMAAVPAILDRVRDGVLKKVNAAGGLSKKLFDLAYSRRLNAINGSWFGAWGLEKALWDALVFKKVRAILGGRIRFILSGGAPLSSDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSFIKLINWPEGGYLIDDLPMPRGEIVIGGPNVTLGYYKNEEKTRESYKADDRGMRWFYTGDIGRFHPDGCLEIIDRKKDIIKLQHGEYVSLGKVEAALSVSPYVDSIMLYADPFHSYCVALVVPSQSATEEWASRQGIAYSDFSELCRKEETVQEVKASLVKEAKKARLEKFEIPGKIMLLSDPWTPESGLVTAALKIKREAIRRAFAEELEKLYSS 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0293 1002 Gene3D Tetratricopeptide repeat domain 13 157 IPR011990 GO:0005515
Lele28g0293 1002 Gene3D - 863 1000 IPR045851 -
Lele28g0293 1002 SMART tpr_5 21 54 IPR019734 GO:0005515
Lele28g0293 1002 SMART tpr_5 55 89 IPR019734 GO:0005515
Lele28g0293 1002 MobiDBLite consensus disorder prediction 136 212 - -
Lele28g0293 1002 Pfam TPR repeat 30 69 - -
Lele28g0293 1002 SUPERFAMILY TPR-like 27 101 IPR011990 GO:0005515
Lele28g0293 1002 CDD LC_FACS_euk1 409 988 - -
Lele28g0293 1002 Pfam AMP-binding enzyme 409 869 IPR000873 -
Lele28g0293 1002 ProSitePatterns Putative AMP-binding domain signature. 560 571 IPR020845 -
Lele28g0293 1002 SUPERFAMILY Acetyl-CoA synthetase-like 363 1000 - -
Lele28g0293 1002 Gene3D - 361 861 IPR042099 -
Lele28g0293 1002 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 345 1000 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0293 Lele-ChrLele28 1721767 1734238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0293 328 1001 Acyl Lipid Metabolism Gene Families AT2G04350 64.254 0.0 929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0275 25 1620403 1626587 Lele28g0293 28 1721767 1734238 hybridization
Lele26g0285 26 1672810 1680860 Lele28g0293 28 1721767 1734238 hybridization