Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0282 ATGGCAGATTCAAGGGTGGAGACCATATCAAGACTAGCACAATGGAAAATTGACAAATTCGGACCTTGCTCCTACAAGAAATCCGATCCTTTCAAGGTCGGGCTCTGGAACTGACTGAGAAGTTTTGACAAATTTGTGCCTTACAGAAGTGAGATTCATGAACGACTGCTTAGAACATGTGATGACTTTGTCTGGCCCGTTGATACTACATTTGTTGGTCGTTTCATTATTGACGTTGAATTCCTTGACCTGAAGATCTGTCCTCTGAATGGTGGAGAAGCTAGTTCTATATGGCCGTCTGATGGAAAATTGCAGTCTGTTGCTGCGCAAAGTGCCCTCCAATGCATCTCTCGCATGCTTGATGAGGGAATGCATGCTGATCTTACCATTAACACTGCAGATGGTACATTGAGAGCTCACAAGGCAGTTTTATCTGCAAGTTCTCCTGTGTTTCAGAGCATGTTTCATCACAACCTGAAGGAAAAATAA 489 0.4335 MADSRVETISRLAQWKIDKFGPCSYKKSDPFKVGLWNXLRSFDKFVPYRSEIHERLLRTCDDFVWPVDTTFVGRFIIDVEFLDLKICPLNGGEASSIWPSDGKLQSVAAQSALQCISRMLDEGMHADLTINTADGTLRAHKAVLSASSPVFQSMFHHNLKEK 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0282 162 SUPERFAMILY POZ domain 108 161 IPR011333 -
Lele28g0282 162 ProSiteProfiles BTB domain profile. 126 162 IPR000210 GO:0005515
Lele28g0282 162 Gene3D Potassium Channel Kv1.1; Chain A 104 162 IPR011333 -
Lele28g0282 162 PANTHER OS08G0495500 PROTEIN-RELATED 1 42 IPR044714 -
Lele28g0282 162 CDD BTB_POZ_ZBTB_KLHL-like 125 162 - -
Lele28g0282 162 Pfam BTB/POZ domain 119 160 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0282 Lele-ChrLele28 1689179 1690973 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele28g0282 BTB 1e-08 CL0033