Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0271 ATGTCTGGTACCTCCGTTTCTTCCTCCATTGACGTTGCTGTCATTCAGGTCCTTCTCAGATCTGAGTTCGATTCAGTATTTGATCTTTTGGTTTTCCTTCTTTGTTCCTCACAGTGGTGGAAGCTCACTCTAGCTTCGCTGCTTAAACAAAATCGGACGCGAAATGGAGCTGAATTGAGGTGTTTTGCTGGAGAACGTGGCTTCGGAGCTAGTCAGAAGGAAGGAATTCTTCGGCATTTGCATTTTGATGAGAAGGAGGGCTTAAGTGGCATATCAGAGCAAATGTCAAAGTGTACATCTCCGGAACCGTCACTGTCCATTTATTCTTCATCTTGGACTAGGGAAACTAAACTGGCAGAAGAAATGAATGATCCAGAATCTACAATGACTACAGTTGCTAGTTTTGTTGAGCAACTGCATGCCAACTTGTCATCACCACTTGAGAAGGAATTTATCACAGCACGTTTGCTAGGCATTGCCAGGGCAAGAAAGGATGCTAGAATACTTATTGGCTCTCATGCCCAAGCAATGCCATTGTTCATAAGCATTCTCAGAAATGGAACCCTTCTGGCAAAAGTTAATGTTGCTGCCACTTTGAGTGTCCTGTGCAAAGACGAGGATTTGAGGTTAAAAGTACTTCTTGGTGGTTGTATCCCATCTTTACTGTCACTTTTGAAGTCTGAAACCACAGAGGCAAGGAAGGCCGCATCTGAAGCAATATATGAAGTTTCCTCTGGCGGTCTTTCAGATGATCATGTTGGCATGAAAATTTTTGTCACAGAGGGTGTAGTTCCAACTTTATGGGATCAACTAAATCCAAAAAACAAGCAAGACAAAGTTGTGGAGGGTTTCATTACTGGGGCATTGAGAAATCTGTGTGGTGACAGAGACAGATACTGGAAAGCGACATTGGAAGCAGGGAGTGTGGATATTATTGTGGCTCTCTTGTCTTCAAACAATGCTGTTGCTCAGTCAAATGCAGCTTCTCTGCTAGCACGACTGGTGCTGGCTTTCAGTGATAGCATCCCCAAAGTACTAGAATCTGGTGCAGTCAATGCTTTACTTCGGCTTGTTGGTCGGGAAAATGATATTTCTGTCCGAGCAAGTGCTGCTGATGCTCTAGAGGCCCTTTCATCGAAGTCAACTAAAGCAAAGAAAGCCATTGTCAGTGCAGATGGTGTTCCAATTCTTATTGGGTCTATAGTTGCTCCTTCTAAAGAGTGTATGCAAGAAAACGGCCAGGATCTGCAGGAGCATGCAACTCACGCTTTGGCAAATATTTGTGGTGGCATGTCTTCTTTAATACTATATCTTGGAGAACTCTCCCATTCTCCTCGCCTAGCTGCACCAGTTGGTGATATAATTGGAGCTTTTGCCTATACACTGATGGTGTTTGAGGACAAACACAATGTTGATAGGGAGCCTTTTGATGCAACTAAAATAGAGGATATTCTAGTGAAAATATTAAAGCCTCGGGATAACAAGCAGATTCAAGAGCGAGTACTAGAGGCCATGGCTAGCCTATATGGAAACATCTATCTCTCGAAATGGCTTGTGCATGCGGATTCAAAAAAGTTTCTTATTGCACTCATTACTATGGCTGCTGCTGATGTGCAGGACTATCTTATACTCTCCTTGACAAGCTTGTGCTGTGATAGGGTAGGAATATGGGAGGCCATAAACAGAAGAGAAGGCATCCAATTACTCATCTCAATGCTGGGACTCAGTGAGCAGCACCAAGAGTATGCAGTTCAGTTGCTATCAATTTTAATTGATCAGATTGATGACAGCAAATGGGCAATCACTGCTGCTGGAGGAATTCCTCAATTGGTTCAGTTATTAGAGACAGGATCGCAGAACGCTAGAGAGGAAGCTGCTCATATTCTGTGGAACCTCTGCTGTCACAGTGAAGATATTCGTGCATGTGTTGAAAGCGCAGGGGCCATACCAGCATTCTTATGGCTTTTAAAGGTTGGTGGACCAAGAGGACAAGAAGCTTCTGCCATGGCACTCATTAAGCTTGTTCGAATAGCTGATTCTGCTACCATTGATCAATTGTTGGCATTGCTTCTTGGGGAAACTCCAGGCTCAAAGGTCTATGTAATTCGAGTCTTAGGTCATGTACTTACTATAGTTTCACAGATGGACCTCCTGCAGGAGGGTTCTGCAGCTAATAAGGGGTTGAGATCTCTAGTTCAGGTTCTCAACTTATCAGATGAAGAAACCCAGGAACATGCGGCTTCTGTCCTAGCTGATTTGTTCAGTGCCAGACAAGACATCTGTGATAGCCTCCTTGCTACTGATGAAATTGTGCTTCCTTGCATGAAGCTTTTGGCCAGCAAAAATCAAGTTGTTGCAACTCAGTCAGCTAGAGCAATGGCTGCCCTGTCTCATCCAACATACAGAAGATCTGCCAATAAGATGCCTTATATTGGAGAGGAGGATGTCAAGCCACTAATTAAATTGGCTAAAACTTCCTCCATTGATGCCGCCGAAACTGCAGTTGCTGTGCTGGCCAATCTTCTCTTTGATACCTCTATTGCTGCTGAAGCTTTGGCAGGAGATCTTGTTTCATCTTTAACAAGAGTTCTGGCAGAAGGAACTCTGGAAGGTAAACAAAACGCATCACGTGCACTTCATCAGCTACTGAAGCATTTTCCTGTTGGTGATGTTCTCAAGGGAGATGCTCACTACCGTTTCACTGTTCTTGCACTTGTTGGTTCCTTGAGTGCTATGAATATGGATGGAACTGATGCTGCTGATGCTTTAGAAGCAGTTGCACTGCTTGCCCGGACAAAACAGGGCGACAATTTCACTTACACTCCATGGCCTGCATTTGCAGAATCACCATCCAATATAGAACCTCTTGTACGCTGCCTGGCTGAGGGGCCTCCCCAAGTGCAGGATAAGGCAATTGAAATTTTGTCTAGACTTTGTGGTGATCAATTAGTTGTTCTTGGGGATTTGTTGGCTGCTATGTCTAGATCCATTAGTTCATTAGCTGATAGAATGATGAACTCCTCCAGTTTAGAAGTCAAAGTTGGAGGGGCTTCCTTACTTATTTGTGCTGCAAAGGAGCATAAAGAGCTGTCAATGGATGTACTTGTCACTTCTGGGGATCTAAAACCATTAATATATGCTTTAGTAGATATGCTGAAGCAGAACTCTGGCTGTTCATTGGAGGTTGAAGGACAAACTCCTAGAAATTTTATGATGAAGAGTGCATTTCAGGAAGTTGATCTTGATATTCTTGATCTGGCCAAAGTCTCGAGTGTTACTGTTGCCTTGTGGCTACTCTCGATTATTGCTTCTTCCAATATAAAGAACAAACTCACAATTATGGAAGCTGGTGGACTTGAGTCTCTCTCTGAAAAGCTTGCAAACCATACTTCCAATCCACAGGCAGAATTTGAGGATGCAGAAGGAATATGGATAAGTGCCTTGCTCATGGCCATTTTGTTTCAAGATGGAATTGTTGTTCTATCTCCAGTAACAATGCACATTTTACCTTCTCTCACTCATTTACTACGGTCCGAAGAAGTGGCATATAAATATTTTTCTGCACAGGCTATGGCTAGTCTTGTTTGTAATGGTGATAAGGGAATAGCTCTTGCTATCGCAAACTCTGGTGCCGTTGCTGGATTGATTTCTATGATTGGCTATATAGAGTCAGACATGCCAAACATTGTTGCTTTATCAGATGAATTTTCACTGGTGCGAAATCCTGATCAAGTAGTTTTGAATCACCTTTTTGAAATTGAAGATATAAGATTGGGATCTAGCGCACGGAAATCTATACCTCTCTTGGTGGATCTATTAAGACCAATTCCAGAAAGGCCTAGTGCTCCACCAATTGCTGTTAAACTGTTGACATGCATTGCAGATGGAAGTGATACAAACAAAATAATCATGGCTGAAGCAGGCGCTTTGGAAGCTTTGACAAAATACCTGTCTTTGAGCCCTCAAGACTCAACTGAGGCCAGTATTTCTGAGTTATTAAGAATACTATTTTGCAATTCTGACCTTATTAAACATGAAGCATCAGCAAGTTCTCTGAACCAACTCATTGCTGTTTTGCGTCTTGGATCAAGAAATGCTAGATATAGTGCAGCAGGAGCACTTTGTGAACTTTTTGATTCCGAGAGTATTAGAAACTCAGAAATAGCTAAACAGGCCATTGAGCCTTTGATTGACATGCTCAATACAACATCAGGTAGTGAGCTGGAGGCTACTCTAATTTCATTAATCAGATTGACGTCCGGAAATTCTTCAAAAGCATCTTTTTTTGCTGATGTAGAAGGGAACCCACTTCAGAGTTTATACCAGATATTGTCTTCTGCTTCATCCTTGGAACTGAAGAGAAATGCTGCGCAACTTTGCTTTGTCCTTTTTGCTAGCAGGACGATTAGAGCTGATCCACTTGCCTCAGAATTCATAGAACCCCTTGTTTCATTGATGCAGTCTGATTCTGGCCCGGCAATAGAAGCTGGGATTTTTGCTTTTGAGAGATTATTGGAAGATGAACAACATGCGGAGCTTGCAGTAGCCTTCAATGTTGTGAATCTCCTTGTTAGTTTGGTTGTGGGTTACAACTATCAGCTGATTGAGGCTACCATATCTGCTCTCATCAAATTGGGCAAAGATAGGACGCCATGCAAACTAGACATGGTTAAAGCTGGCATTATTGATAATTGTCTGAAGCTACTTGAATTTGCACCTAGCTCACTGTGCTCCACAATTGCTGAACTATTCCGCATTTTAACAAATAGTAGTGCAATTGCTAGAAGTTCAGCAGCTGCAGAAATTGTAGAACCCCTTTTTCAAGTTTTGCTCCGTCTAGATTTTGACTTGTGGGGACAGCATAGTGCCTTACAAGCTCTTGTAAATATATTGGAGAAGCCACAAAGTCTTGCAACCTTAAAACTAACTCCTAGCCAAGTTATTGAGCCCTTGATCTCATTCCTGGAATCCCCATCCCAAGCCATTCAGCAGCTTGGCACTGAACTGTTGTCTCATCTTCTTTCACAGGAACATTTTCAGCAAGATATTAAAACAAAGAATGGTGTTGTTCCTCTTGTTCAACTTGCAGGAATTGGAATACTGAACTTACAGCAAACAGCAATAAAAGCATTGGAGAAAATCTCCAAAAGATGGCCAAAAGCAGTTGCTGATGCGGGAGGCATTTTTGACCTTGCAAAGGTTATTATGCAAGATGATCCTCAGCCACCACATGCCCTCTGGGAATCAGCTGCTGTAGTTCTTTCTAACGTATTATGTTCCAATGCTGATTATTATTTTAAAGTTCCTGTGGTAGTTCTTGTAAAACTGTTGCACTCAACGGTTGAGAGAACCATTAGTGTAGCTCTTAATGGCCTAATGATTCATGAAAGAAGTGATGCTTCAAGTGCTGAACAGATGATGGAGGCTCAAGCTATAGATGTTCTGTTAGACCTTTTAAGATCTCATCAATGTGAAGAAGCATCTGGCAGATTACTTGAAGCTCTATTCAACAATGTGAAAATAAGAGAGATGAAGGGATCTAAGTATGCAATAGCACCGTTATCTCAGTATCTGTTAGATCCACGGACCAGATCACCATCTAGCAAGCTTCTTGCTGCTTTAGCTTTGGGAAATATTTCCCAGCATGAAGGACATGCTAGAGCTAGTGGTTCTGTTTCTGCTTGTCGTGCATTAGCAAGTTTACTTGAGGATCAGCCAACTGAAGAAATGGTGATGGTTGCTATTTGTGCGTTGCAAAACTTTGTTATGAACAGCAGGACTAATAGGAGAGCTGTTGCAGAAGCTGGTGGCATACTGGTGATTCAGGAATTACTTCTGTCTACAAATCCAGAAGTTGCAGGACAAGCAGCATTGCTCATCCGATTTTTATTTTCTACTCACACACTACAAGAGTATGTGTCAAATGAGCTGATCAGATCTCTGACAGCTGCACTGGAAAGAGAGTTGTGGTCAACTGCCACAATCAATGAAGAGGTTTTGAAAACTCTGCATGTCATATTCTCGAACTTCCCTAAGCTCCACGTGTCTGAAGCAGCAACTCTTTGCATTCCTCATTTGGTAGGGGCACTCAAATCTGGCAGTGAAGTGGCTCAAGACTCTGTACTAGACACCTTGTGCTTACTAAGACATTCATGGTCAACCATGCCAATTGATATATCAAAGTCTCAGGCTATGATCGCTGCTGAAGCCATTCCTATCCTGCAAATGCTCATGAAAACCTGTCCCCCAAATTTCCATGAGAGAGCAGATAGTCTTCTGCATTGCTTACCAGGTTGTTTGACTGTCACCATTAAACGTGGAAACAACCTCAAGCAAGCTATGGGAAGTACGAATGCATATTGCCAGTTAACGATAGGCAATGGTCCCCCAAAACTAACCAAGGTTGTGAGTCACAGTATTTCGCCAGAATGGAAAGAAGGATTCACATGGGCATTTGATGTGCCTCCAAAGGGCCAGAAGTTGTACATCATATGCAAAAGCAAGAATACTTTTGGCAAGGCAACTCTTGGGAGAGTTACGATACAAATTGATAAAGTGGTAAACGAGGGAGTTTACAGTGGAATATTCAGTCTTAATCTCGACAGAAACAAAGATGGTTCTTCCCGAACTCTTGAGATTGAGATTATATGGTCCAACAGGATCTCTGATGAAGACCTTTGA 6681 0.4242 MSGTSVSSSIDVAVIQVLLRSEFDSVFDLLVFLLCSSQWWKLTLASLLKQNRTRNGAELRCFAGERGFGASQKEGILRHLHFDEKEGLSGISEQMSKCTSPEPSLSIYSSSWTRETKLAEEMNDPESTMTTVASFVEQLHANLSSPLEKEFITARLLGIARARKDARILIGSHAQAMPLFISILRNGTLLAKVNVAATLSVLCKDEDLRLKVLLGGCIPSLLSLLKSETTEARKAASEAIYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDKVVEGFITGALRNLCGDRDRYWKATLEAGSVDIIVALLSSNNAVAQSNAASLLARLVLAFSDSIPKVLESGAVNALLRLVGRENDISVRASAADALEALSSKSTKAKKAIVSADGVPILIGSIVAPSKECMQENGQDLQEHATHALANICGGMSSLILYLGELSHSPRLAAPVGDIIGAFAYTLMVFEDKHNVDREPFDATKIEDILVKILKPRDNKQIQERVLEAMASLYGNIYLSKWLVHADSKKFLIALITMAAADVQDYLILSLTSLCCDRVGIWEAINRREGIQLLISMLGLSEQHQEYAVQLLSILIDQIDDSKWAITAAGGIPQLVQLLETGSQNAREEAAHILWNLCCHSEDIRACVESAGAIPAFLWLLKVGGPRGQEASAMALIKLVRIADSATIDQLLALLLGETPGSKVYVIRVLGHVLTIVSQMDLLQEGSAANKGLRSLVQVLNLSDEETQEHAASVLADLFSARQDICDSLLATDEIVLPCMKLLASKNQVVATQSARAMAALSHPTYRRSANKMPYIGEEDVKPLIKLAKTSSIDAAETAVAVLANLLFDTSIAAEALAGDLVSSLTRVLAEGTLEGKQNASRALHQLLKHFPVGDVLKGDAHYRFTVLALVGSLSAMNMDGTDAADALEAVALLARTKQGDNFTYTPWPAFAESPSNIEPLVRCLAEGPPQVQDKAIEILSRLCGDQLVVLGDLLAAMSRSISSLADRMMNSSSLEVKVGGASLLICAAKEHKELSMDVLVTSGDLKPLIYALVDMLKQNSGCSLEVEGQTPRNFMMKSAFQEVDLDILDLAKVSSVTVALWLLSIIASSNIKNKLTIMEAGGLESLSEKLANHTSNPQAEFEDAEGIWISALLMAILFQDGIVVLSPVTMHILPSLTHLLRSEEVAYKYFSAQAMASLVCNGDKGIALAIANSGAVAGLISMIGYIESDMPNIVALSDEFSLVRNPDQVVLNHLFEIEDIRLGSSARKSIPLLVDLLRPIPERPSAPPIAVKLLTCIADGSDTNKIIMAEAGALEALTKYLSLSPQDSTEASISELLRILFCNSDLIKHEASASSLNQLIAVLRLGSRNARYSAAGALCELFDSESIRNSEIAKQAIEPLIDMLNTTSGSELEATLISLIRLTSGNSSKASFFADVEGNPLQSLYQILSSASSLELKRNAAQLCFVLFASRTIRADPLASEFIEPLVSLMQSDSGPAIEAGIFAFERLLEDEQHAELAVAFNVVNLLVSLVVGYNYQLIEATISALIKLGKDRTPCKLDMVKAGIIDNCLKLLEFAPSSLCSTIAELFRILTNSSAIARSSAAAEIVEPLFQVLLRLDFDLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLSQEHFQQDIKTKNGVVPLVQLAGIGILNLQQTAIKALEKISKRWPKAVADAGGIFDLAKVIMQDDPQPPHALWESAAVVLSNVLCSNADYYFKVPVVVLVKLLHSTVERTISVALNGLMIHERSDASSAEQMMEAQAIDVLLDLLRSHQCEEASGRLLEALFNNVKIREMKGSKYAIAPLSQYLLDPRTRSPSSKLLAALALGNISQHEGHARASGSVSACRALASLLEDQPTEEMVMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSTNPEVAGQAALLIRFLFSTHTLQEYVSNELIRSLTAALERELWSTATINEEVLKTLHVIFSNFPKLHVSEAATLCIPHLVGALKSGSEVAQDSVLDTLCLLRHSWSTMPIDISKSQAMIAAEAIPILQMLMKTCPPNFHERADSLLHCLPGCLTVTIKRGNNLKQAMGSTNAYCQLTIGNGPPKLTKVVSHSISPEWKEGFTWAFDVPPKGQKLYIICKSKNTFGKATLGRVTIQIDKVVNEGVYSGIFSLNLDRNKDGSSRTLEIEIIWSNRISDEDL 2226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0271 2226 Gene3D - 902 1427 IPR011989 -
Lele28g0271 2226 Gene3D C2 domain 2099 2225 IPR035892 -
Lele28g0271 2226 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 110 2220 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lele28g0271 2226 Gene3D - 484 705 IPR011989 -
Lele28g0271 2226 Gene3D - 706 891 IPR011989 -
Lele28g0271 2226 SMART arm_5 381 429 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 1837 1881 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 250 294 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 1297 1337 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 594 634 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 1507 1547 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 205 245 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 1925 1965 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 295 336 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 716 755 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 803 843 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 338 379 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 1549 1589 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 1676 1716 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 1634 1675 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 636 676 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 844 884 IPR000225 GO:0005515
Lele28g0271 2226 SMART arm_5 551 592 IPR000225 GO:0005515
Lele28g0271 2226 CDD C2 2100 2190 - -
Lele28g0271 2226 Pfam C2 domain 2099 2198 IPR000008 -
Lele28g0271 2226 Pfam Armadillo/beta-catenin-like repeat 598 633 IPR000225 GO:0005515
Lele28g0271 2226 SUPERFAMILY ARM repeat 1701 2096 IPR016024 -
Lele28g0271 2226 Gene3D - 1436 1696 IPR011989 -
Lele28g0271 2226 SUPERFAMILY ARM repeat 165 400 IPR016024 -
Lele28g0271 2226 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2097 2199 IPR035892 -
Lele28g0271 2226 Gene3D - 285 462 IPR011989 -
Lele28g0271 2226 SMART C2_3c 2099 2195 IPR000008 -
Lele28g0271 2226 SUPERFAMILY ARM repeat 407 575 IPR016024 -
Lele28g0271 2226 Gene3D - 1701 2098 IPR011989 -
Lele28g0271 2226 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 349 393 IPR000225 GO:0005515
Lele28g0271 2226 SUPERFAMILY ARM repeat 578 886 IPR016024 -
Lele28g0271 2226 SUPERFAMILY ARM repeat 1267 1636 IPR016024 -
Lele28g0271 2226 Gene3D - 104 283 IPR011989 -
Lele28g0271 2226 ProSiteProfiles C2 domain profile. 2079 2196 IPR000008 -
Lele28g0271 2226 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 605 647 IPR000225 GO:0005515
Lele28g0271 2226 SUPERFAMILY ARM repeat 952 1228 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0271 Lele-ChrLele28 1604075 1613434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0271 566 806 U-box Gene Family AT2G23140 30.800 2.82e-11 67.0