Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0270 ATGGCTTCAGCAGATCTACAGCTACCACCCGGCTTCAGATTCCACCCGACGGATGAGGAGCTCGTGATGCACTATCTTTGTCGTAAATGTGCATCGCTGCAGATAGCTGTTCCGATTATTGCTGAAATCGATCTTTACAAGTATGATCCTTGGGACCTTCCCGGCCTGGCTCTGTATGGGGAGAAGGAGTGGTATTTCTTCTCGCCGAGAGACCGCAAATATCCGAATGGTTCGAGGCCGAACCGGGCGGCTGGGACCGGCTACTGGAAGGCGACCGGAGCTGATAAGCCCATCGGTCACCCAAAACCGGTTGGGATCAAGAAAGCTCTGGTATTTTACGCAGGAAAAGCGCCCAAAGGCGAGAAAACAAATTGGATCATGCATGAATACCGTCTCGCAGAGGTGGATCGCTCCGCTCGCAAAAAGAATAGTTTAAGGCTTGATGACTGGGTGCTTTGCCGTATCTACAACAAGAAAGGTGCCATCGAGAAGCAACCGCTTCCTCTGAGCTGGAAAACCGAGTCATCTGAAATTATCGAGGACCAGAAGCCACAGCATTTGACCCGTGCCGGCGCATTTCCTCCTCCTCCGCCGCCGGCTCAAGCGCCGTCAGCGATGACCGATTACATGAATTTTGACACCTCCGATTCAGTCCCCAAGCTGCACACGGATTCGAGCTGTTCGGAGCAAGTGGTCTCGCCGGAGTTCACCGGTGAGGTGCAGAGCGAGCCCAAGTGGAATGAGTGGGAGAAGAACCTTGATTTTCCGTATAATTACGTAGATGCCACTCTGTCGCCGTTGCAGGACATGTTCATGTACCTGCAGAAGCCCTTGTGA 837 0.5293 MASADLQLPPGFRFHPTDEELVMHYLCRKCASLQIAVPIIAEIDLYKYDPWDLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLAEVDRSARKKNSLRLDDWVLCRIYNKKGAIEKQPLPLSWKTESSEIIEDQKPQHLTRAGAFPPPPPPAQAPSAMTDYMNFDTSDSVPKLHTDSSCSEQVVSPEFTGEVQSEPKWNEWEKNLDFPYNYVDATLSPLQDMFMYLQKPL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0270 278 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Lele28g0270 278 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Lele28g0270 278 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Lele28g0270 278 FunFam NAC transcription factor 17 162 - -
Lele28g0270 278 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Lele28g0270 278 PANTHER NAC TRANSCRIPTION FACTOR 56 8 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0270 Lele-ChrLele28 1595615 1596989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0270 6 277 NAC Transcription Factor Family AT1G01720 72.297 2.41e-146 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele28g0270 NAM 2.6e-38 No_clan