Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0267 ATGTGCTGTCTAGTCCTTAAGTTTCTTATATCTAAACCTCGGTGGAGGAAGTTTCTATCCTTTGCAGGTCCTGGTTTTCTGGTCTCCTTGGCTTACCTTGATACTGGAAACTTGGAAACTGATCTGCAAGCTGGAGCTGACCACAGATATGAGGTAGAGAAGGAGAAAGAGTCTTGCTTGAAAGCCCTTCATTATTTTCTGTGTCTCTTGTTTGCACTCATTATTCAATCATTGGCTGCAAACCTTTGGGTCTCCACTGGGAAGCACCTTTCGGAACTATGTAAAGTGGAGTATCGATGGCTAGCGAAGTACTGCTTGTGGTTGTTGGCTGAGATTGCTGTCATAGCCGCGGACATACCAGAAGTTGTTCGCACAGCCTTTGCTCTTAACATACTGTTCCACATCCCACTATGGGCAGGAGTTCTCTTGACCGGCTTCTCCACTCTCTTGCTTCTTTCTCTTCAGAGATTCGGGGTTAGGAAGTTGGAATTGATGATATCAGTTCTAGTAGTTGTAATGGCGGGATGTTTCTTTGGGGAGATGAGCTATGTAAGACCCCCAGCTTCTCAAGTTTTGAAGGGAATGCTTGTCCCTAAACTTAGTGGTCAAGGATCCGTTGGAGACGCCCTTGCCCTTCTCGGTGCACGCACAACCTCTTTCTCCATGCTGCTCTTGTACTCTCTAGAAAGGAGGCGTGCCGATACTGCCAATGACCTTACAGCTCAAGATATAGATAGATGCAATGATCTCTCCCTTGATTCTGCCTCTTTCCTTCTCCAGAATGTGTTGGGAAGGTCCAGCAAAACCGTTTATGCCATAGCACTTCTGGCCTCTGGACAAAGCTCTGCTATCACGGGCACCTATGCAGGGCAGTACATCAAGCAGAGTAGCACCAAGATGGGACCTCATAAGAATTCCTTGATTGTGGGTTATCTATCTTCCTCTACAAAGTTAAGCTGTAAACAACAGTCCCACTACTCTCCCAAAGGTGGCAAACGTGTTCATTGGGATCATATTATTTCTTCTTATGGCCATTTACGTTCTTGCCATTATCCACCTCACTTTCAGAAAAGACACTACTCAAAACATTTAGAGGCACAAAACGACCCCGTGGCGCCAACCCACATGGAAAAGGGGCTAGTTAATGCTACTCAACAATTGGAAATGAGTCAAGTTCCTTGA 1182 0.4577 MCCLVLKFLISKPRWRKFLSFAGPGFLVSLAYLDTGNLETDLQAGADHRYEVEKEKESCLKALHYFLCLLFALIIQSLAANLWVSTGKHLSELCKVEYRWLAKYCLWLLAEIAVIAADIPEVVRTAFALNILFHIPLWAGVLLTGFSTLLLLSLQRFGVRKLELMISVLVVVMAGCFFGEMSYVRPPASQVLKGMLVPKLSGQGSVGDALALLGARTTSFSMLLLYSLERRRADTANDLTAQDIDRCNDLSLDSASFLLQNVLGRSSKTVYAIALLASGQSSAITGTYAGQYIKQSSTKMGPHKNSLIVGYLSSSTKLSCKQQSHYSPKGGKRVHWDHIISSYGHLRSCHYPPHFQKRHYSKHLEAQNDPVAPTHMEKGLVNATQQLEMSQVP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0267 393 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 241 296 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele28g0267 393 PRINTS Natural resistance-associated macrophage protein signature 209 232 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele28g0267 393 PRINTS Natural resistance-associated macrophage protein signature 159 180 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele28g0267 393 PRINTS Natural resistance-associated macrophage protein signature 106 132 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele28g0267 393 PRINTS Natural resistance-associated macrophage protein signature 134 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele28g0267 393 Pfam Natural resistance-associated macrophage protein 250 297 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele28g0267 393 Pfam Natural resistance-associated macrophage protein 65 240 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0267 Lele-ChrLele28 1577435 1580327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0267 12 295 Inorganic Solute Cotransporters AT1G15960 47.531 8.59e-92 284