Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0264 ATGACAACCCAGAATCGTCGTCCTTCGTTTTCTTCCTCCACGACATCGTCGTTGGCGAAACGGCATGCGTCGTCATCGTCGGAGAATGTGGGGAAGCCTATGGCGGCCCTGCCTCCACACATGACCAAGAAGCGAGCGCCTCTCGCCAACTTGACCAATCAAAAGAATATATCCCACTCTGCGTCGCGAAACCCTCCGCCATCATCAACTCTGGTACCTGGTGCTACTAAAATCGCCAAGACAAACAAGGAACACACCTCGTCGAATGTTAAATCAAGTGCGGTTGTTTTCCCCAAGGCTAGTTCATTCACACAAAAAGATGAAGCTGTTCCTACAGTTACAGCTTTCACCGTTCCTGTTTCTACCAATTTGGATGCAAAATCAAGTGCCATTGATTTTCCCAAGGTTGCTTCTGCTCCTCAAAAGTCTGAAGCTGCTCCTGCAGTTTCCAATTCCACCGTTCCTCTTACAAGCATCATGGATGTTTCTCCTAGTAAATCAGATGGGATGTCTCTCTCTATGGATGAGACTATGTCTACTTGCGATTCATTCAACAGTCCTGAGGTTGAATATTTGGACAATACCGATGTTTCAGCTGTTGACTCTATTGGTAGAAAGACATTGAACACTCTGAACATCTCAGATAATACAGAAAGACCAACAGGCAACATTTGTGACAGAGACATACTTGTTGAGTTGGAGAGAGAAGATAAAATTGCCAATATTGATAATAATTACATGGATCCACAGCTCTGTGCGAGCTTTGCTTGTGACATCTACCAGCATTTGCGTGCATCTGAGGCCAAGAAAAGGCCTTCTACAGATTACATGGAGAGAGTTCAGAAGGACATAAATCCCAGCATGCGTGCTATATTGGTTGACTGGCTTGTAGAGGTGGCTGAAGAGTACCGGCTCGTGCCTGATACATTGTATTTGACAGTGAACTACATAGATCGGTATCTTTCAGGGAATGCTATGAGCAGGCAAAAATTACAATTGCTTGGAGTTGCCTGCATGATGATTGCCTCTAAATATGAGGAGATTTGCGCGCCTCAGGTGGAAGAATATTGTTATATAACTGATAACACATACTTCAAGGAGGAGGTTTTGCAAATGGAATCTGCGGTGTTGAATTTTCTCAAGTTCGAAATGACGGCCCCCACAATTAAATGTTTCTTGAGACGATTCGTTCGCGCAGCTGAAGGAGTGAATGAGGTGCCATCATTGCAATTAGAGTGCTTGGCCAACTACATTGCGGAACTGTCTCTCTTGGAGTATAGCATGCTTTGTTATGCCCCTTCACTCATCGCTGCTTCTGCTATTTTCCTCGCCAATTATCTTCTCTTCCCTTCCACCAAGCCCTGGAATTCTACATTGCAACATTATACACTTTACCAGCCTTGTGATTTAAGCGACTGCGTCAGGGATCTGCACCGTCTGTGCTGTAACACCCTCACTTGTAATTTACCCGCTATCCGAGAGAAATACAGTCAGCACAAGTACAAATATGTGGCTAAGAAGTACATTCGTCCATCGATACCTCAAGAATTTTTCCAGAATTGA 1563 0.4453 MTTQNRRPSFSSSTTSSLAKRHASSSSENVGKPMAALPPHMTKKRAPLANLTNQKNISHSASRNPPPSSTLVPGATKIAKTNKEHTSSNVKSSAVVFPKASSFTQKDEAVPTVTAFTVPVSTNLDAKSSAIDFPKVASAPQKSEAAPAVSNSTVPLTSIMDVSPSKSDGMSLSMDETMSTCDSFNSPEVEYLDNTDVSAVDSIGRKTLNTLNISDNTERPTGNICDRDILVELEREDKIANIDNNYMDPQLCASFACDIYQHLRASEAKKRPSTDYMERVQKDINPSMRAILVDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMSRQKLQLLGVACMMIASKYEEICAPQVEEYCYITDNTYFKEEVLQMESAVLNFLKFEMTAPTIKCFLRRFVRAAEGVNEVPSLQLECLANYIAELSLLEYSMLCYAPSLIAASAIFLANYLLFPSTKPWNSTLQHYTLYQPCDLSDCVRDLHRLCCNTLTCNLPAIREKYSQHKYKYVAKKYIRPSIPQEFFQN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0264 520 PANTHER CYCLINS 195 498 IPR039361 -
Lele28g0264 520 SMART Cyclin_C_2 387 510 IPR004367 -
Lele28g0264 520 SMART cyclin_7 294 378 IPR013763 -
Lele28g0264 520 SMART cyclin_7 391 479 IPR013763 -
Lele28g0264 520 CDD CYCLIN 288 377 IPR013763 -
Lele28g0264 520 Gene3D - 258 506 - -
Lele28g0264 520 FunFam Mitotic cyclin 6 272 372 - -
Lele28g0264 520 MobiDBLite consensus disorder prediction 160 179 - -
Lele28g0264 520 SUPERFAMILY Cyclin-like 387 509 IPR036915 -
Lele28g0264 520 FunFam Cyclin A1 374 506 - -
Lele28g0264 520 CDD CYCLIN 385 478 IPR013763 -
Lele28g0264 520 Pfam Cyclin, C-terminal domain 387 506 IPR004367 -
Lele28g0264 520 ProSitePatterns Cyclins signature. 289 320 IPR006671 -
Lele28g0264 520 MobiDBLite consensus disorder prediction 1 49 - -
Lele28g0264 520 Gene3D - 272 385 - -
Lele28g0264 520 PIRSF Cyclin_A_B_D_E 131 516 IPR039361 -
Lele28g0264 520 PIRSF Cyclin_A_B_D_E 1 193 IPR039361 -
Lele28g0264 520 SUPERFAMILY Cyclin-like 248 384 IPR036915 -
Lele28g0264 520 MobiDBLite consensus disorder prediction 1 31 - -
Lele28g0264 520 Pfam Cyclin, N-terminal domain 258 384 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0264 Lele-ChrLele28 1560971 1563898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0264 4 520 Core Cell Cycle Gene Families AT1G44110 58.767 0.0 550