Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0260 ATGGGCTCGTGTGGGAAATCAAGTATATTAGATGACGCCTCAAGCGAGTCTGTTATTGAGCAGCACTCATGCGCAGAGTTTCCAATGCAGTCTATTCCTGTGCAGCAGTCCTGTCCAGTAGTAACCTGCAATGCATTGGACTCTAATGTCGAGCACTCCAATATGATGGAGGTCCACACTGGGTCTGCAAGCACCATTGATGTTACAGAGATGTCCAGAGATTCATCGTCGATGATGAACAAGAATGAAAATACTGATAGGTTACAATGCTCATGCAGAAAAGTTACTTGCAATGCGGTGGACTTTAATGTTGAGCATTCCAATAAGATAGAAGGCTGTATGAATTTTTCTGGAGAGATCCACACTGGGTCTTCAAGCTCCATTGATGTTCCAGAGATGTCCAGAGATTCTTTGTTGATGGCGAACAAAAGTGAAAATACTGAGAGTTTACAGCGGTCCTGTCCAGTAGTTACTAGCGTTGTGTTGGACTCTAATGTTGAGCACTCCGATACGATGGAAGGTTGTATGAATTCGTCTAGAGAGGTCCACACAGGGTCTGCAAGCCCTGTTGATGTTACAGAGGTGCCCAAAGATTCATTTCTGATGGTGAATAAAAATGAAAATATTGACATGTTACAACAGTCTTGTCCAGTAGTAAGATGCAATGTGTTGGACTCTAATGTTGATCACTTCAATACGATGGGAAGTTGTATGAATTTTTCTAGAGAGGTCCACACTGGGTCTGCAGTCTCCATTAATGTTCAAGAGACGTCCAGAGATTCAATGTTGACGGTGAACAAAAATGAAAATACTGGTATATTACAACAGTCTTGTCCAGCAGTAATTTCCAGTGTGTTGGACTCTGATGTTGATCACTCCAATATGATGGAAAGTTGCATGAATTCATCTAGGGAGGTCCACACTGGGTTTGCAGGCTCCATTGATGTCCAAGAGATGTCCAGAGATTCAATGTTGATGGCGAACAAAAATGAAAATACTGGGATATTACAACAGTCTTGTCCAGCAGTAATTGCTAGTGTGTTGGACTCTGATGTTGAGTGCTCCAATATGATGGAAGGTTGTATGAATTCGTCTAGAGGGGTCTGCTCTGGGTCTGCAAGCACCATTTATGCTTCAGACATAACCAGAAATTCATTGTTGGAGAACAAAAGTGGAAATTCTGTTATTGCACAACAACCCTGTCTAGTAGCTACTTGCAATGCGTTGGATTCTAATGTTGAGCACTGCAACCTGATGGAAGGTTGTATGAATTCAACTAGAGAGGGGGCAAGCTCCATTGATGCCCCAGAGGTAACCAGAGATTCATTGTTGATGGAGAACAAAAGTGAAAATACTGATATTTTACAACAGTCCTGTCCAGTAGTAACTTGCAATGCGTTGGACTCTAATGTCGAGCACTCCAACATGATGGAAGGTTGTATGAATTCATCCAGAGAAGTCCATACGGGGCCTGCAGGCCCTATTGATTTTCCAGAAATGTCAGAAGATTCATTGTTGAGGGTGAATAGAAGTGAAAATACTGAGATGTCACTTCTGGAGAAAACCTCAAAGAATGATAGCCAGACTTGTCCAAGTATATTTTGTGCACAAATTGAAGTTTCTAATCTAGAAAGTGTCAAGTTGGTCTCAGAAGGAAAACCTTATGCCAAAGATGGTCTCAAAATGCCATCAGATTTCATATTGACCAGTGGTTCACCTGTGGTTTATTGTGACCAACAAAGTGAACAAGAGGACACAGTAAGGAATGCTAATCCAGTGTTGGAGGGTGTGAACGAAGGTGATTTTAATTGTGGGATTGAAGCAGATGCCTGCAAGCAGACTCATTCACAGGGCAGTGAAGTACCTGCAGATGTAATATATACTGAAGCAGAGGCCATAAATGATCAGTTGCATGATCAGAAAGATTATGGTGATGAGAATAGTCATTTTGAAGACTTTGTTGATAAAGAAAGTATCATTGATACACATGTCCAAGAATTCTCCTCACCAAGCCATCAAAGGATCTTGGGGAGTTTGCCTGTAGCTTATTCACCTGGAGAGGCTACCCACTCAGAGAGGGGGATTGATAATATTGATACTGATTTTGATGCAGAAGATGTTGTGAAAGTTAAGGGAAAAAATAATGATGTTATGACTGAAACAAATGTTGAAATGAAGAACAATATACCGCCAGATGATAATGCATGTAAGTTAAATGATAGTTCCTCAAAAACAGATGCCAACTGTACCTTGAGAAAAACGTTTCCTCCTGAATCAGATCTTCCTTCTGTTGATTATATCAGTATTAGCTCTCCAAAGGATGCGCCTGATCTTCTCAAGGAGGTCCATGGTTCCATCAGTTATAGTAGCCTTGTGGGTGATTCTGGAGAGGCAGACTGTATTAGGAAAGATATTATACATGTTGATTGTTTCTCTGAAAGCAATTATTCTGGGAATACATCCTTGCCTATTCGAAGGAATAGTCAAAGAAGTAAATCTGGTCATAAGACGCATACCAGAAGGGCTTCGAGGAAATGCAAGAACAAAACCAGTGTGCCACTCCTAGGTGGGGATATGAAGATAATCTTGGAGGCTGCTAGAAAGAAAAGAAGCTGTTTCTCTAAACCAGCTCGCTCTTCTATCTGGGGATTGGTAGGAAACATTAACAAGTGTTTTGAACAAGATAATGAGTTTGGAGTTGATGAAGTTATGTGTCAAGGATTGGGGAAGGTGAGAGGTGCCCGTAAAAGTGGGAAGAGAAACAAGAGTGGTGCAATTTCTAGCTCATTGAATTCAATGAAGAAATGCTGTGCTTCAACTACTCGTGTTCGTCTGAAGATTACACTGGGGAAAGAAATCCATTTAAGTTGTTCAGATGTGTTGATTCCAGAGTTTATAAACGGTTCATGTTCTTCTTCTAACGTGGGGCCTGATCCAGGCTCTCAGGAAAGAAACAGCGATGCTGGAGATAAATGTTCAGAAGAGGTTGCAGTAGGCAAGTCTGAATCTTTAACAAACAACCTGGATGAGGATGCTGTTGTTCTGAATGGACAAATGGCAAATCGCCACTTAGAAGCTGCTGCAACAACAGAAAAGCCAGATAAGGTCACAGAGGAAGTATCTTATATGATTCCTCCAGAGAGGGTGTTTGAACCGTTGAGAGAGACAGTCAATGATAAGGGGATGGATCCTGGAACTTCGCCTGATTCGGAAGTTATCAATTCAATTCCTGAAGTCCAGGTTGGAGAAAGACATCAACAGGGTTTGCTGGATGCTATTCTTGATTCTTCTAAGGTGTCTGATTCTCTTGGAGGGGTATCAAATTGCAGGAGAAGGAAGAAGAAAGACAAACTTACTTCCTCAAGTAGTTCTATTGTTGAAGATGGCTCACAAGGGCCACCAAGGAAAAATAAAACTAAGCACTCAAAGAATCGTGGACGTAAAAAGAATTCCAATGATGTGGTTTGCTCCATGAGTTTGCATACTTCCACTGGGATAAATGCCGTGAGCTACTCATTAAGCCATAAAGAATTATCCAGTGAATCATTGCCCCCATCTGGAGAGATTGAACTAGAAGACTCCACTGAGGCTTTGAAAGTCAAAAGTTTGGAAGTTGAAACTACTTGCAGCCCAAATGACAATTGTGAGCTTTTAGAATCCCAGGGCATTGGTAATTTGCTGTCTTCAGCCAGATCCTCAGGTCGTAAACTTCCTAAAAGTCTTACATCTTGTAAAATCATCACCCCAAAACCCAAGTCAAAAGCTTCTGACTCAATGAGCCGGAAAAAGACTGGTAGCAGACGTAGGGAGAAACAACTGAAACCTATTAAGAAGAGTGAAGTCAAGGGAAAAGCTGCCTCTGAAAAAGTTATCTCTGAAGCAGAAGATTGTCTGCATGCAGAACATGTTGATGGAAGTTATAAATTGGATGATACCGGAAAAATTGATGGTGACAACAAAGTATCAGTAAATGGATCCAATTCGGACATGGCGGTTGGTACTGGTTTGGAGGAGCAGCATCCAGCACCTAATAATGCATGGGTGCGCTGTGATGATTGTCACAAGTGGCGGCGTATTTCTGTTGAGCTTGCAGATCTGATTGAAGAAACAAAGTGCACCTGGACCTGTAAGGATAGCAATGAAAAAGCCTTTTCTGATTGCTCTATCCCCCAAGAAAAGTCAAATGTAGAGATCAACACGGAGTTGGGATTATCGGATGCTTCAGGTGAAGAAGATGCTTATGAAGGCTGTAAAAATTGTAGGAAGTTGGAATATCAACACCCAACAGTTCACCAGGAGTCAACTTTTACCCATATTCTTACTAATGAGTTTCTGCACCGCAGCCGCAAAAATCAGACTATTGATGAGATAATGGTTTGCCATTGTAAACCACCATCAGAAGGTAGGTTTGGTTGTGGGGATGAATGTCTAAATCGGATGCTCAACATTGAATGTGTTCAAGGAGCCTGCCCATGTGGGGATCTTTGTTCAAATCAACAGTTCCAGCAACGCAAGTATGCCAGCTTGACGTGGTTTAAATGTGGGAGAAAAGGTTACGGGTTGAAGGCAATTGAGGATATATCTAAAGGGAAGTTTCTTATTGAATATGTTGGGGAGGTGCTTGATATGCATACTTATGAGGGACGGCAAAGGGAGTATGCTTTCAAGGGTCATCGGCATTTCTACTTCATGACCTTGAATGGCAGCGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGACGTTTCATTAATCATAGTTGTGATCCTAATTGCCGTACAGAAAAGTGGATGGTGAATGGTGAAATCTGTATTGGACTTTTTGCATTGAGGGATATAAAGCAGGGTGAAGAGGTGACATTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCACCTCTATGTCGTGGTTATATAGGTGGTGGTGATCCACTTAACGCCGAAGTCATTGTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCAGTGATGCTTACAGAAGATGGTGAAATCGAAGGCAGTATACCTAGATCTGATTTTATGCAGGCTGAAAGGAATTTATCAAAAGACAGAGATCTAGTTGACAAGTCCAGAAGTGCTCCAGTGCCCGGTAATAATCAGGAGAAAGAGAACTCTGCAAACCCATCTCCTGCTATTTCCCTGTTGCACTGCCCATTAGATGGGGAAGATTCAATGGGCAAATTACCATCATCTGACGTGGAAGAAATTTCTAAACAAATGAAGGATGGAATTAGTAAATCCGAGCTTCCTGACAATATTTCTTCCCTCCAAAGAATGGAGGCTTCCGATGCACCTATTAGTAGAGTGATATCAAATTTTATTAGGAAGAGAAGGGAATTCAAGCCTGAAATAGTTGAAGACAGCCCTGGTTTTCCAAAAACACATCTGCTTGTGAAGACTTCCCGAGCAAATGGTTCCGTTAAAAAGGGAAAGGTTCATGCTAATCATTCAAATGGCCTCAAAGCTGCAGTGACAGCCAACAGATTGCAGGCAACATTGATCAAACCTAAAAAGGCGGTGGAAGGTTCTTCCAATGGCCGTTTTGAAGCAGTTCAGGAGAAACTTAAGGAGTTGTTAGATGAAGATGGGGAAGGAGGAATAAGCAAAAGAAAAGATGCAACCAAAGGCTATTTAAAGCTTCTGCTTCTCACTGTGGCATCAGATGATAGGAATAATGGCGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGGCGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAGAATGGTCTACAAATGTTGCATAACATTATGAAGCAGTACAGACGGGATTTCAAGAAAACTCCCATACTACGGAAGCTTCTTAAGGTCTTAGAGTATCTAGCAGCAAGCAAGATTTTGACATTTGAACACATTAATGGCGGTCCCCCTTGTCATGGAATGGAGAGCTTTAGGGAGTCCATGTTGTCTCTGACAGAGCATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTTCGGGACAGATGGATTCGTAGACCTTTCAGAAGGCATGGTTATGTGGACCGAGATGATTTTAAGGGAGAATCTCATAGGAATTTTAATTGCAATAGATTTTCAGCATCACAGGACCATAGGAGGGACCCAGATGTTAGACCAACGGAAGCAATAGATTGTGCCCAGCAATCAAAACTTGTGACAACTTCAGTAGATGCTGGTGCCCAGGAGGGCCGCTCTGCACAGTCTTCAGATGGGCGCAAAGTTGATGGGACAAAAAGGCGTAAGCGTAAAAGCAGATGGGATCAACCTGCAGAAACAATTTCAATTTTATCATCCAGCCCATGTAAGAAACAAAATGTTGATTCTGGGCTATCAATGCATGCTGATGCAGCTACTGACTCTTTTGATGGAGGTCAGAACATTAGTGAGGATTTTCCCCCAGGTTTTTCATGTCCTGTTCAACCGCAATTCGGTTCTTCGAATGCTTCCCCTCACCCTGTAATTGGACATGCAAAGGAGAAATTTAATTCTCGCATGCCTGTCTCATACGGAATGCCATTATCTTTTGTCCAGCAGTTTGGCACACCTCATGCTGAAATATCAGATAGTTGGGTCATTGCGCCAGGTGTGCCTTTTAGCCCATTTCCTCCATTGCCCCCCTATCCACAGGATAATAAAGACTGTCAACCTTCTAGCTCTACTAATGCTGCTCTTGTAGATCAGCCCGTTGAAGTTCAGTCACGGGATATGAGTGGTCCAGTTGGTTGTTACTCTGATAATATTACTCCCAGCACAACTGATACTAGCCCTAAAGACATTGACCTTCCACATGAAGACGATCAACAACTTTATAAACGTTTAAAAGGTTCCTCTTGTGATTTGGGAAGAAAGTACTTTAGGCAGCAAAAATGGAATAATTCAAAAATACATCGACCCTGGTTCAGGAGGAATGCGTGGGGATCTAGTGGGAACTACACTGCTGGAGGTAAATGCAGTATAAGTGTAGGAGATGAACCAAATGAGTCAAAAGTTGCATATTCTTCAGAGGATGTATTCTGCAGAACGGAGGAAGGTGACAATAATATTTAG 7122 0.4187 MGSCGKSSILDDASSESVIEQHSCAEFPMQSIPVQQSCPVVTCNALDSNVEHSNMMEVHTGSASTIDVTEMSRDSSSMMNKNENTDRLQCSCRKVTCNAVDFNVEHSNKIEGCMNFSGEIHTGSSSSIDVPEMSRDSLLMANKSENTESLQRSCPVVTSVVLDSNVEHSDTMEGCMNSSREVHTGSASPVDVTEVPKDSFLMVNKNENIDMLQQSCPVVRCNVLDSNVDHFNTMGSCMNFSREVHTGSAVSINVQETSRDSMLTVNKNENTGILQQSCPAVISSVLDSDVDHSNMMESCMNSSREVHTGFAGSIDVQEMSRDSMLMANKNENTGILQQSCPAVIASVLDSDVECSNMMEGCMNSSRGVCSGSASTIYASDITRNSLLENKSGNSVIAQQPCLVATCNALDSNVEHCNLMEGCMNSTREGASSIDAPEVTRDSLLMENKSENTDILQQSCPVVTCNALDSNVEHSNMMEGCMNSSREVHTGPAGPIDFPEMSEDSLLRVNRSENTEMSLLEKTSKNDSQTCPSIFCAQIEVSNLESVKLVSEGKPYAKDGLKMPSDFILTSGSPVVYCDQQSEQEDTVRNANPVLEGVNEGDFNCGIEADACKQTHSQGSEVPADVIYTEAEAINDQLHDQKDYGDENSHFEDFVDKESIIDTHVQEFSSPSHQRILGSLPVAYSPGEATHSERGIDNIDTDFDAEDVVKVKGKNNDVMTETNVEMKNNIPPDDNACKLNDSSSKTDANCTLRKTFPPESDLPSVDYISISSPKDAPDLLKEVHGSISYSSLVGDSGEADCIRKDIIHVDCFSESNYSGNTSLPIRRNSQRSKSGHKTHTRRASRKCKNKTSVPLLGGDMKIILEAARKKRSCFSKPARSSIWGLVGNINKCFEQDNEFGVDEVMCQGLGKVRGARKSGKRNKSGAISSSLNSMKKCCASTTRVRLKITLGKEIHLSCSDVLIPEFINGSCSSSNVGPDPGSQERNSDAGDKCSEEVAVGKSESLTNNLDEDAVVLNGQMANRHLEAAATTEKPDKVTEEVSYMIPPERVFEPLRETVNDKGMDPGTSPDSEVINSIPEVQVGERHQQGLLDAILDSSKVSDSLGGVSNCRRRKKKDKLTSSSSSIVEDGSQGPPRKNKTKHSKNRGRKKNSNDVVCSMSLHTSTGINAVSYSLSHKELSSESLPPSGEIELEDSTEALKVKSLEVETTCSPNDNCELLESQGIGNLLSSARSSGRKLPKSLTSCKIITPKPKSKASDSMSRKKTGSRRREKQLKPIKKSEVKGKAASEKVISEAEDCLHAEHVDGSYKLDDTGKIDGDNKVSVNGSNSDMAVGTGLEEQHPAPNNAWVRCDDCHKWRRISVELADLIEETKCTWTCKDSNEKAFSDCSIPQEKSNVEINTELGLSDASGEEDAYEGCKNCRKLEYQHPTVHQESTFTHILTNEFLHRSRKNQTIDEIMVCHCKPPSEGRFGCGDECLNRMLNIECVQGACPCGDLCSNQQFQQRKYASLTWFKCGRKGYGLKAIEDISKGKFLIEYVGEVLDMHTYEGRQREYAFKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQGEEVTFDYNYVRVFGAAAKKCYCGSPLCRGYIGGGDPLNAEVIVQGDSDEEFPEPVMLTEDGEIEGSIPRSDFMQAERNLSKDRDLVDKSRSAPVPGNNQEKENSANPSPAISLLHCPLDGEDSMGKLPSSDVEEISKQMKDGISKSELPDNISSLQRMEASDAPISRVISNFIRKRREFKPEIVEDSPGFPKTHLLVKTSRANGSVKKGKVHANHSNGLKAAVTANRLQATLIKPKKAVEGSSNGRFEAVQEKLKELLDEDGEGGISKRKDATKGYLKLLLLTVASDDRNNGEAIQSNRDLSMILGALLKTKSRAVLNDIINKNGLQMLHNIMKQYRRDFKKTPILRKLLKVLEYLAASKILTFEHINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWIRRPFRRHGYVDRDDFKGESHRNFNCNRFSASQDHRRDPDVRPTEAIDCAQQSKLVTTSVDAGAQEGRSAQSSDGRKVDGTKRRKRKSRWDQPAETISILSSSPCKKQNVDSGLSMHADAATDSFDGGQNISEDFPPGFSCPVQPQFGSSNASPHPVIGHAKEKFNSRMPVSYGMPLSFVQQFGTPHAEISDSWVIAPGVPFSPFPPLPPYPQDNKDCQPSSSTNAALVDQPVEVQSRDMSGPVGCYSDNITPSTTDTSPKDIDLPHEDDQQLYKRLKGSSCDLGRKYFRQQKWNNSKIHRPWFRRNAWGSSGNYTAGGKCSISVGDEPNESKVAYSSEDVFCRTEEGDNNI 2373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0260 2373 MobiDBLite consensus disorder prediction 1708 1726 - -
Lele28g0260 2373 MobiDBLite consensus disorder prediction 2093 2113 - -
Lele28g0260 2373 MobiDBLite consensus disorder prediction 2051 2070 - -
Lele28g0260 2373 ProSiteProfiles SET domain profile. 1507 1624 IPR001214 GO:0005515
Lele28g0260 2373 Pfam AWS domain 1470 1504 IPR006560 GO:0005634|GO:0018024
Lele28g0260 2373 MobiDBLite consensus disorder prediction 2228 2288 - -
Lele28g0260 2373 Gene3D - 1336 1400 - -
Lele28g0260 2373 SUPERFAMILY SET domain 1435 1645 IPR046341 -
Lele28g0260 2373 MobiDBLite consensus disorder prediction 2236 2252 - -
Lele28g0260 2373 ProSiteProfiles AWS domain profile. 1455 1505 IPR006560 GO:0005634|GO:0018024
Lele28g0260 2373 PANTHER SET DOMAIN PROTEINS 843 2117 - -
Lele28g0260 2373 Pfam CW-type Zinc Finger 1347 1393 IPR011124 GO:0008270
Lele28g0260 2373 ProSiteProfiles Post-SET domain profile. 1632 1648 IPR003616 -
Lele28g0260 2373 MobiDBLite consensus disorder prediction 1101 1155 - -
Lele28g0260 2373 MobiDBLite consensus disorder prediction 2079 2161 - -
Lele28g0260 2373 Gene3D SET domain 1423 1648 IPR046341 -
Lele28g0260 2373 ProSiteProfiles Zinc finger CW-type profile. 1341 1395 IPR011124 GO:0008270
Lele28g0260 2373 MobiDBLite consensus disorder prediction 829 847 - -
Lele28g0260 2373 MobiDBLite consensus disorder prediction 2115 2131 - -
Lele28g0260 2373 Pfam SET domain 1518 1624 IPR001214 GO:0005515
Lele28g0260 2373 SMART PostSET_3 1632 1648 IPR003616 -
Lele28g0260 2373 MobiDBLite consensus disorder prediction 821 847 - -
Lele28g0260 2373 FunFam Histone-lysine N-methyltransferase 1406 1663 - -
Lele28g0260 2373 SMART shorttest3 1455 1506 IPR006560 GO:0005634|GO:0018024
Lele28g0260 2373 SMART set_7 1507 1630 IPR001214 GO:0005515
Lele28g0260 2373 MobiDBLite consensus disorder prediction 973 1003 - -
Lele28g0260 2373 MobiDBLite consensus disorder prediction 1246 1285 - -
Lele28g0260 2373 CDD SET_SETD2 1506 1648 IPR044437 GO:0010452|GO:0046975
Lele28g0260 2373 MobiDBLite consensus disorder prediction 1693 1726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0260 Lele-ChrLele28 1519890 1533688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0260 1490 1647 C2H2 Transcription Factor Family AT2G23740 33.702 1.08e-19 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele28g0260 SET 2.9e-19 No_clan