Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0259 ATGCATTTATATCATCACCCTTTTGATTTGAACAGCCAGAAGGTGAGGCTTGCATTGGAAGAGAAAGGCATTGACTATACGTCTCACCATGTCAATCCCATTACAGGCAAGAATTTGGATGCCCCATTCTTTCAGATGAATCCCAGTGGAAGGCTACCTGTTTTCCAAAATGGTTCCCACATCCTTTACGAGACTATCGATATAATCCAGTACGTAGAAAGAATTGCTAAGGTTTCCTCTGCCGCTGAGGGTATCAGTGTTAGTGGCAGGGAAGTTATTGAATGGATGAGAAAGATACAAGAGTGGGATCCCAAGTTTTTCACACTCTCCCATATACCAGATAAATATCGCATTTATAGCTCCAAGTTTATAAGGCGGGTGGTGATTGCTCGAATGTCTGAATCCCCTGAGCTAGCTGGAGCTTACCACAGTAAGTTGAGAGAAGCTTATCAGACTGAAGAAAAATTAAAAGACCCTGATGTGTTGAGGAGGAGCAAGGAGCACTTGCTTATGCTTCTTGATGAAGTGGAGAGGCAGCTTAGTGAAACGCCTTATTTAGCAGGTCAAGAGTTCACCATGGCCGATGTGGTGCTCATTCCTGTGTTGGCTCGTTTGGTGCTCTTGGATTTAGAACAAGAGTACATAGCTGACAGGCCAAACACTGCTGAGTACTGGCTGTTGGTTCAGCAGAGGCCTAGCTATAAAAAAGTTATTGGCAAGTATTTTGATGGTTGGAGAAAGAACAAAATGTTACTGAAAACGTGGTGCTGTGTTCGCGTTAGAAGCTTTCTAAACAAATACTAG 804 0.4316 MHLYHHPFDLNSQKVRLALEEKGIDYTSHHVNPITGKNLDAPFFQMNPSGRLPVFQNGSHILYETIDIIQYVERIAKVSSAAEGISVSGREVIEWMRKIQEWDPKFFTLSHIPDKYRIYSSKFIRRVVIARMSESPELAGAYHSKLREAYQTEEKLKDPDVLRRSKEHLLMLLDEVERQLSETPYLAGQEFTMADVVLIPVLARLVLLDLEQEYIADRPNTAEYWLLVQQRPSYKKVIGKYFDGWRKNKMLLKTWCCVRVRSFLNKY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0259 267 CDD GST_N_family 1 73 - -
Lele28g0259 267 SUPERFAMILY GST C-terminal domain-like 145 241 IPR036282 -
Lele28g0259 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Lele28g0259 267 Gene3D - 128 238 - -
Lele28g0259 267 Gene3D Glutaredoxin 1 86 - -
Lele28g0259 267 Pfam Glutathione S-transferase, C-terminal domain 161 223 - -
Lele28g0259 267 SFLD Main (cytGST) 1 231 - -
Lele28g0259 267 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Lele28g0259 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Lele28g0259 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Lele28g0259 267 CDD GST_C_family 147 225 - -
Lele28g0259 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 61 251 IPR010987 -
Lele28g0259 267 SUPERFAMILY Thioredoxin-like 1 75 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0259 Lele-ChrLele28 1514545 1515694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0259 1 267 Glutathione S-transferase Gene Family AT1G77290 70.037 5.08e-141 395
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0237 25 1402750 1403893 Lele28g0259 28 1514545 1515694 hybridization
Lele26g0246 26 1451005 1453647 Lele28g0259 28 1514545 1515694 hybridization