Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0258 ATGAAAATGCTGAAAGCGGGCCTAGCGGGAGAAGGCAGCGACGGGAAATCAAGTGGCCGGACGGTGTTGGTGGGAGTGAAGTTGGATTCTCCTAGCAGAGAGTTGCTCACATGGGCTTTGGTTAAGGTTGCTCAGCCCGGTGATATTGTGGTTTCTCTTCATGTTCTTGGGGACGATGAAATTGTAAACCGAGACGGGAAGGCTTCGCTTCTTTCGCTTGTCAAGGCATTTGACTCTGTTCTTGCTGTTTACGAAGGTTTTTGCAATTTGAAACAGGTGGATCTAAAGCTCAAAATCTGCAGAGGCTCGTCAGTCCGGAAAATCTTAGTTCGAGAAGCAAACGCCTATTCTGCAACTCATATTTTAGTGGGAATTGCTCAAGTCCTTCATAGAATTCGAGCATCTACCTCCGTAGCTAAGTACTGTGCTAAGAAGCTTTCCAAGGACTGCTGGGTTATTGCTGTCAATAATGGAAAAATTGTATTCAAGAGAGAAGGCTCATCAGCAGCTCCTGTTGACTTGCAAGGAATTGATAGTCGTGGCAGAAATGGCCTGCTTGCTTCAATTCACCGGACATTCAGTTCTAGTTCCAAAGTACTAAATGATGACAAAACAGGAATAGTTGATAAGGGTACTTGCAAAACTTCAGATAATAGCTTAGCCAAGGCCTTTCTTGATTCTACAGAAACCGTTCAGAAAAGGAGCTGCTCGCTTTGTGGTCCATCATATGCATTGCCAAATTCTGGTTGCAACCAAGCTGCAGAAGAGTCTTCTGGTGATAGTGACAAAGAGAATTCTATGTCTATAGTGCTTGCACAGCCGACTGAGGCAGCATCAAGTGCTAGGGTTCTGTCAGTCAGAGAATTGCCTGAACTAAAACCCGGTTGGCCACTACTGCACAGGACAATTTCATCAGGTCGGCAATCTCCTGGCAGATCATTGGTGCGCCAGATCTCAGTGGTTCAGTGGGCAATGCAGTTGCCGAGTAGAAATCTTTCATATGCAGGGGATCATGTTCACAGACCAGCCAGTTCTGATCCAGATCATCATCATTCTTTGGCTTTAGATAGCGAGAGTGGTGCTATTGTTCCAGTTAATGCTCAATTAGGGACTGCCTCTTCACCTGACCATAATTCAAGGAAAATTCCCAAAGAATTGGAGGGTCTTCATGAGAAATACTCATCAACCTGCAGATTGTTTCAGTACCAAGAACTTTTATTGGCTACGTCAAATTTCTTGCCTGAAAATTTGATCGGGGAAGGAGGAAGTAGTCAGGTTTATAGAGGCCATCTTCCTGATGGCAAGGAACTAGCAGTTAAGATCTTAAAGCCCTCTGATGATGTTTTAAAGGAGTTTCTTTTGGAAATAGACATTATCACTACCTTGCATCACAAGAACATTATTTCTCTCCTGGGATTCTGCATTGAGGATGGCAATCTTCTTTTGGTGTATGATTTCCTATCAAGAGGAAGCCTTGAAGAGATTCTTCATGGGAGCAATAAAAATCCACTTGTGTTTGGCTGGACCGAGAGGTATAAGGTGGCAGTTGGTCTTGCTGAGGCTCTGGATTATCTGCATAACAGAGATGCTGAACGGGTGATTCACAGGGACGTGAAGTCATCAAATGTATTATTATCTGAGGATTTTGAACCCCAGCTATCTGATTTTGGGCTTGCTAAATGGGCATCAACCTCATCATCTCACATAACTTGCACAGACGTTGCTGGGACCTTTGGCTACTTGGCTCCAGAGTATTTCATGTATGGCAAAGTAAATGCTAAGATTGATGTCTACGCATTTGGAGTCGTACTCCTTGAGCTTCTAACAGGAAGAAAGCCCATAAGCGGTGATTGTCCAAAAGGTCAAGCGAGCCTCGTCATGTGGGCAAGTCCAATTCTGAATAGTGGAAAAGTTGCACAATTATTAGATCCAAGTCTGGGTAGCAACTACGATCAGGACCAGATGGAGAGGATCGTCTTGGCAGCGTCGCTTTGCATCAGACGTGCTCCGAGAGCTAGGCCTCAAATGAGCCTTATTACAAAGCTGCTTCAAGGTGATGCTGATGTAATTAAATGGACAAGGTTAGAAGTTAACGCTTCTAAGGCATCAGAAACGCACTACGAAGCTTGTCCACCTTCTAATTTACAGTCACATCTCAATCTAGCATTACTTGACGTGGAGGATGACTCACTCTCCATGTGCAGTATTGATCAAAATGTGTCGTTAGAGGACTACTTGAAAGGCAGGTGGAGCCGCTCATCAAGCTTTGATTGA 2274 0.4437 MKMLKAGLAGEGSDGKSSGRTVLVGVKLDSPSRELLTWALVKVAQPGDIVVSLHVLGDDEIVNRDGKASLLSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSVRKILVREANAYSATHILVGIAQVLHRIRASTSVAKYCAKKLSKDCWVIAVNNGKIVFKREGSSAAPVDLQGIDSRGRNGLLASIHRTFSSSSKVLNDDKTGIVDKGTCKTSDNSLAKAFLDSTETVQKRSCSLCGPSYALPNSGCNQAAEESSGDSDKENSMSIVLAQPTEAASSARVLSVRELPELKPGWPLLHRTISSGRQSPGRSLVRQISVVQWAMQLPSRNLSYAGDHVHRPASSDPDHHHSLALDSESGAIVPVNAQLGTASSPDHNSRKIPKELEGLHEKYSSTCRLFQYQELLLATSNFLPENLIGEGGSSQVYRGHLPDGKELAVKILKPSDDVLKEFLLEIDIITTLHHKNIISLLGFCIEDGNLLLVYDFLSRGSLEEILHGSNKNPLVFGWTERYKVAVGLAEALDYLHNRDAERVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLTGRKPISGDCPKGQASLVMWASPILNSGKVAQLLDPSLGSNYDQDQMERIVLAASLCIRRAPRARPQMSLITKLLQGDADVIKWTRLEVNASKASETHYEACPPSNLQSHLNLALLDVEDDSLSMCSIDQNVSLEDYLKGRWSRSSSFD 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0258 757 FunFam Putative receptor-like serine/threonine-protein kinase 487 699 - -
Lele28g0258 757 ProSitePatterns Protein kinases ATP-binding region signature. 418 440 IPR017441 GO:0005524
Lele28g0258 757 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 19 156 - -
Lele28g0258 757 Pfam Protein kinase domain 416 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0258 757 Gene3D Phosphorylase Kinase; domain 1 376 486 - -
Lele28g0258 757 CDD USP_Like 21 153 - -
Lele28g0258 757 Gene3D Transferase(Phosphotransferase) domain 1 487 699 - -
Lele28g0258 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Lele28g0258 757 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 381 486 - -
Lele28g0258 757 Gene3D HUPs 19 156 IPR014729 -
Lele28g0258 757 SMART serkin_6 412 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0258 757 ProSiteProfiles Protein kinase domain profile. 412 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0258 757 SUPERFAMILY Protein kinase-like (PK-like) 393 687 IPR011009 -
Lele28g0258 757 Pfam Universal stress protein family 20 153 IPR006016 -
Lele28g0258 757 PANTHER OS08G0249100 PROTEIN 192 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0258 Lele-ChrLele28 1501255 1504718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0258 399 679 Trihelix Transcription Factor Family AT1G68690 45.804 7.49e-75 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele28g0258 Pkinase 2.2e-43 CL0016