Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0257 ATGTTTATCAATAAGGCTAAGGGCAATTTTGTGTGTGATGCTAAGATTCATCAGCAGGCAAGGTACGCTCCTCTTCCTCCTCATCACCCGCGCCATTCACAGTTCCCTGAAGATCCCCGTTTGCTCCCTCACCACCTTCCTCCTCCGCCTCCTCCGGCGGCACCAACTCTTCCACCCCCACCCCCTCCTCCGTCTCTTTCCCATCGAAACGTCCGCACTCCTCCTCAACCGCATCCTCACCCCTACAATTCCCCTCATCAATCCCAGTTTTCTTTCAAGTCTCCGAATTATGCCCACCGTCAGGTTGAAGAAGAACGGCCTGTATCTGCTAGCCATCCTCATGATTTTACACACTCGCAGAGGGTTTCAAATCGGATGATTATTGATAATGATCGTCCTCGCCACAGTTTCCCTGATTTAGACTATAGCAATTCCGATATCCGCACCGGTGGTTGGAACCCACCGAGGGTTTTCTCAGATAATCGGCCGTCGAGGCCTTACCCTCCCGCTGACTTTGACCGGGAATTACAGCATCAGCAGCCATCGAATCACAAAATAGCGCCGCCATATCCGCCAATTGATAAAGTTAGGTATATTTCAGATGGCAACTTGAGGGGAAGAATTGATCACATTGATGGGTATGAAGTCAAGACAAGGGAAGAGTTTGCATGGGGTAGAGGGGATGAGAAATATCATCGCCGAAGGGATTTTGGATCTAATCTCAATGCATCTTCTGGATACTTCGGAATCATGTCTAGTCAGAGTACATTATCAAGAGATCTTGATTCGAAGAATGGGGATTATGCGCATGACGGCATGGAACGGGACAACGAAATATCTAGGGGTACTAGAAGAGATGGACTTGGTGATAGCAAGAGGTGGGTAAATGATAGGAAGGGCATCAGAGATCCACACAGCTCATCTGTTGAATTGGGAAACAACGAGAACGGGGGTGATGGTATTCGGGTAACGTCCGGGAAGTATTATGGTTCGGAATTGGGTAGATATAATAATAGAGGGAACAGGGAATCTGGTCTTGAATTTAGTCGTGCTCCAAGGAAACAAATTCAGAAAAAGAGCGCACTTCTTAGAATTCAAATGGTAAAACCAAGTCATAAGAACCGTGAGATTGAACAGTTACAATATACCAGTTATGTCGATGACTCAAACTCTAATTCGTTTAGAGGCAAAGATCAATTTGATTATTCAGGTTTTGGGGTCAAAGCAGAAGAGAGAGAGAGAAGTCCTGTTGAGCTTGATATTTCTTTTAAATCAAATTCTCTGGTGGCTAAGGCCATTGTGGCACCTTCAAGTTCTGCAGTTTCTGATGTAGATATCACACCTGTTTCTGATACAGATTTTGCTCCTGCAGAAAAGGGAAAAAATGGTTTGGCCTCTGATAGTGATTCTCCTGATTTAAAACCCTCCAAACCATCTATGGCTGCCGTAAACTCAGGTGGCTCACCTTGCAAAGTGAATTGCATCGCTAGTTCTAGCAAGGAATTTAACTTACAGAAGAAGGTCTCTGATAGTTGTTCTCAGCTTTGTGCCCGTGTAACTGCTAATTGTCATGTAAAAAATGAGGGGGCTCAAACCCCTAAGGGAATTTTTTCTCATGAAATTACCAACTCTTGTTCTGTTAAACCATCTCCAAGGGTTGCCAAGAAGAAAAAAATCGTAAAGAAAGTGGTGAAGAAAGTTGTTTCGAATCCTAAATTAAATGTCTCAAGTTCCGTGTCCTCATATATTCCCGGTGGAACTGTGAAAGTTGATAGTGTTAGTCCTTCATCTACCTTTGGATCTGACAAAACTGGAACTTCTTTAAAGGAGAAAATCACTGTTGTTGACAAGGTGCCCTTGCCAGATAATTTGCTGTCTTATCCAGAGGAAGGACATCTTCTGCCTGATAATATAACAGGGCCACATACCACTTCACAAGAGCACGATGCTGATGATAACGCTGATACAGGACAAGTAGATAGGATTGAAAGAAGTAGAAACATTTCTAATTCTTCATTGGGTGCTTTTAGCATTAAAGATGAAAACAATGATTCTGATTGTCCGAATGTAGATGATTATGTCCATGGCTTGCATAGTAGTCCAAATACTGACAAGGCTGCTAAGGCTAAGTCACCAAATGGAATTACTTTTTCTGATATTAGTAACAGGGATGATGTTAATATGCAACTTTGTCAGAATGAAGTGTTCCTATCGCCTCAGCAGTATTCAAATGTACAATATTTAGATAATCAGTTTCATGTAGAAGAGGAAAAGAATTGCAGACTGTCAACATCGTCTGAGAGTGTAATTAACACAGATGTTATAAACGCGTATAATTCTGCTAATGTTAGTCTGTCTTGCTTGAGTTTTAATGATCTTACTGGTAATGCACAAAAGAACATTACAGTTTCAGGCTTTGGAAATGATGGTAAAGTAGATTGCAAAACTAAAGTCCTTGCATTATCTGACAGTGTTATTTTGGAAGAACCAGAGACTTACTCCCCTGTACCAAGCAGTGGAATAGATAGTCTTTCAAGTTCTGCTGAAACTAGGATTTCAGATGGTCAAGAGTGCCCAAAACATTCAAGAGAACCCGTGCATGTTTCTGATAACAGCATTACTAATTCAGAAGAGGATATCACGGTTCCCCATAGTGTTATTGTCAAAGATTCTGGAAAGGAGGCATCCCCTGTGGATGTCACTGCATCTCCTGAGAATTGTACCACAGAACATTCTCCAAATGTTAATTTTTTGGTTAGATTCGCTGGAGATACAAATATGTCTAAACAAAGAAAAGTTGAGACACATTTAAATTTTTCAAGTTCAGATATCGGGGGCACATCTACAGACCCTATACATACAGTTAGCCTTGCAAATGTGCATAAAACCTCAAGTCTGTTGAAGGGTTCAAGTGTGTCAGAAGTTTTAAATCCATATGTTCAAAGCTCAGATGTTTGCTTACAATCCAGAACAGGCGGGGTTACTGTTTTACATGGGAAAGGGGAGGTTTCCGAGACAGAAGTTTACTTTGGAAATGGTGCCAGTAACAGTGCAAACAGGGCTTCACCATTGTCTAAAATAAATGAAGTCACTACTAGTCACATGAATGTCACTTTATTGCAAGCTGAACTTTGTGATGCAATTGTGGTTGCCACATCTTGTGCAGAAGCTCCTATTAGTATTAGTGATAACAAGACACACCAGAAAGAGGTTGCATTTTCAAGTATGGTTGAACCTTCTGTTTCTCTATCCCTGCCTTATCCTGAAAGAAGTGCTAAATTGTACAACAATAGTTTGTTTGGAGGATCTGTTGAGTCTGTGGATGCAAATACAAATATTAGAAAGTTTGAATTCTCCCAATTGCAGCACCCGTCCATCAAGTGTGATTCACTTGAGGATTTGACTATTCGAAATGATCAGTTTCCAGTGTTGGAAAACGAGCAGAAAGAAAATTATCTTCCAGTTGTGCCTATAAACAACATTCAGAAGGACATTCTGGTTTCTGGAAATACTGAGAGAGGGAAGTCTGACATACAGGATGTTGAAAAATGTGAGTCCAGAGAATTTGAAGAAAAATCTCCGAGTACTGATTTGGAATCCAGTGATCATCAAACAAAGGATGATTTACCTCTTGAGCATCAATCTCTGCCCTGCCCAGCTGTTAATGATGCTCTAACAACAAGTGACTGCAGCACAGTATCAGATGTGCTTTCTCCAGGAACCATGCCTGACATGCTTGATAATAGGACTTCAAATTGTCAAGCAATCCAAAATGAATGCGTTCAAGGGGATGAAGATAATGCGGATAGAAGATCTAAGGTTGAACATGATTATGACTTATCCGCTTCTACATCATATTCACATTCACAGGATACTAAAAAGAATATAAAGTCAAGTCCTGCAGCCAGACGTGATAACTTGATCACAGGGAAGATGATGCCTCAACCTTTGCAAGTTAATTCCAAAGTTATGACTCAAGGACTGAATCCATCTTGTTCAGAGTTAAGTTTTGGCAAAAATCACTTGGGTTCTGCCATTCCTACCACTTTCCAGGGTCGATCCTACTTAAATTTTCCCAAGACAAAGACATCTGCATATTCAGCCAAGGTTTCAAAACTTCGAACTTGGCATCGTACAGATAATAATTCTGGCTCTCTATCAGGAAAAAAGTCTTTGGCTGGATCTGTGCCTCCCAAAAGGTCAATTTCAGAAAAGAAAGGGAACTTTCATGATACTTCTTATATTCGTAAAGGTAACAACAGTATTGTAAGGAAACATACTTCTGTTTCTGCTTCACCACAATCCACTGCTAATCAGTCTTCTTCTTTGGGGTTTGATGAATTTCATAAGAGCACTGGATCTGAAATTATGGTTGAAATCTCAAATCACACCAATCTCTTGAAAACAGGATTGACACACGCTCCTCTGGAGAGGCAAAGAACACCTCCACTACCTGTTGACACTAAATTACCTGATCATATGGCAACAGTATTTGAGGAGAATAAATCTTCCTCATCAATAGAATCCCTTTCCAATGCTTTCCGTGATAGTGCATCTAAATCAAGAAACTTTATGGAGCCTTGTGATGCTCCAAACTCTGCAGATGATGCACTGAAGTTGGATGAAACTGTTGAAAATCTAACTGTCCCATCAGACAATGTGGAAAGCCTAGTTGAAGCACATGATGAGAATGTGTCTTTGAATTCAAAGAAAATAGTCTATGTAAAGCGCAAATCAAATCAGTTGGTTGCAACTTCAAATTCTTGTGAACTTTCTGTTGCTACTGATGACAATGTCCAGGTGGCCTCTTCCGATGGGTACTACAAGAGGAGCAAAAATCAGTTAGTTAGGACTACTTTTGAAAGTCAAATCTACCAGACAGTTGCAATGCCCACTGTAAACTCTGATGGGCAAAGGGCCCGTAAGGCTAGTGGCAGCAGGAGGTTTGGTAAGAGGCGGTCACTGAAGGATCAGGATTCCACGTTCTTTGAAATATCAGCTTTTCAGTTCTATATGGGTTTTGACCCTCAGATTGTTGGAAGGTCATGCAAACCTTTGAGAGCCTCATTGGTGTGGACACTCTGTGGCGCAAGCACGTCAAAAAATGACAGTGAGTCTCTACGTCATCAGAAGGTTCTGCCTCATTTGTTTCCATGGAAAAGAGCAACATGTTTAAGGAGTTTCATTTATAATCCTTCTTTGAGCTCCAATACTAATTCGTTATCTGCTATCAGCAAGAAATTGGTTCTGTCGAGAAAGAGGGATACTGTTTATACTAGGTCAACCCATGGTTTTTCCCTTCGGAAATCCAAGGTGTTAGGCGTTGGTGGATATAGTCTAAAATGGTCAAAATCAATTGAGAAGTCCTCCAAGAAAGCTAACGAGGAAGCCACGCTTGCAGTTGCTGCTGTAGAGAAGAAAAAGAGGGAACGGAAAGATGTTGCTTCTATCGAGACTATCAGTTCTCGGGCAAAGAGTAGGAAAATTATTCTTTCCACAAGAATTTCATGTCTGCTTGGTGGTCAATTAGGAGAACGTATATTTCGCATTGGGTCTGTTCGTTACAGAATGGACTCTTCGGGGAGGACACTTCAAAGGATTTCAGATGATGAGTACCCGCCCTCTCCTTCTCTCCGTTCGGCCTTGCATGTGAAAAGTTCATACATTCCAAGGAGATTAGTGATTGGAAATGATGAATATGTACGAATTGGCAATGTCCATCAGCTTATCAGAGACCCAAAGAAGCGAACTCGTATATTGGCTAATGAAAAAATTAGATGGAGTTTACACACAGCCAGACAACGGTTGGCTAGAAAGCAGAAGTATTGTCAATTCTTTACTAGATTCGGGAAATGTAACAAGGATGACAGGAAGTGTCCCTATATTCATGATCCCTCAAAAATTGTTGTCTGTACTAAGTTTCTGAATGGTTTATGTTCCGCTCCCAACTGCAAATTGACTCATAAGATTAATATACTGACAAGTTACATGGCAGGTTTATGCACAAACAGAAACTGCCCCTATAGACATGTTAATGTGAACCCTAAGGCATCCGTTTGTGAAGGATTTCTCCGGGGATATTGTGCCGATGGCAATGAGGTATTAAGCTGCCATGTTAAATTTTCAGTAAAATTGGTGAATAATTTGAATGTCGAACTTCTGCTCCTTTCACCGAAATCAGGCATATCAATCTCTTTGCATGCAAATGTTTCATTTCTGCCCATATGGCATCCAATTCCTGCCCCCATATACAAGGGATCTTGCATTAAAACTGTTATTTATGTGGTCTCACAGTGTCGGAAGAAGCACACCTATGTCTGCCCTACTTTTAAAGCGACAGGAATCTGTACCCAAGGGACCAAATGCAAACTTCATCATCCCCAAAAGCAAGGCAAGGGAAAGAAAAGGAAGAGATCCGTAGATCAGAGGAACTGTAAAAGGAGATACTTTGGTTCTTTACGGATTGATGTTTCTGAACCTGGGACGATGGTTGTTGCTCCAAGGCAAGGGGAACAGAATAAGGATGCCCTTGAAGGAGAACTTACTGACTTTATCAGTCTCGATGATGACGATGAAGACATTGCAGAACTTGTGGGACAAGCAAGCGAGCAATCAACATTGTGTGATAGTGAACCTGTAGATATCGTATTAGATGATCAGGATGAACTCATTAAACCTCTTCTGATAATGAAAATGGATATTAGGGCTCAGGCATCTCCTGTCTGA 6726 0.4121 MFINKAKGNFVCDAKIHQQARYAPLPPHHPRHSQFPEDPRLLPHHLPPPPPPAAPTLPPPPPPPSLSHRNVRTPPQPHPHPYNSPHQSQFSFKSPNYAHRQVEEERPVSASHPHDFTHSQRVSNRMIIDNDRPRHSFPDLDYSNSDIRTGGWNPPRVFSDNRPSRPYPPADFDRELQHQQPSNHKIAPPYPPIDKVRYISDGNLRGRIDHIDGYEVKTREEFAWGRGDEKYHRRRDFGSNLNASSGYFGIMSSQSTLSRDLDSKNGDYAHDGMERDNEISRGTRRDGLGDSKRWVNDRKGIRDPHSSSVELGNNENGGDGIRVTSGKYYGSELGRYNNRGNRESGLEFSRAPRKQIQKKSALLRIQMVKPSHKNREIEQLQYTSYVDDSNSNSFRGKDQFDYSGFGVKAEERERSPVELDISFKSNSLVAKAIVAPSSSAVSDVDITPVSDTDFAPAEKGKNGLASDSDSPDLKPSKPSMAAVNSGGSPCKVNCIASSSKEFNLQKKVSDSCSQLCARVTANCHVKNEGAQTPKGIFSHEITNSCSVKPSPRVAKKKKIVKKVVKKVVSNPKLNVSSSVSSYIPGGTVKVDSVSPSSTFGSDKTGTSLKEKITVVDKVPLPDNLLSYPEEGHLLPDNITGPHTTSQEHDADDNADTGQVDRIERSRNISNSSLGAFSIKDENNDSDCPNVDDYVHGLHSSPNTDKAAKAKSPNGITFSDISNRDDVNMQLCQNEVFLSPQQYSNVQYLDNQFHVEEEKNCRLSTSSESVINTDVINAYNSANVSLSCLSFNDLTGNAQKNITVSGFGNDGKVDCKTKVLALSDSVILEEPETYSPVPSSGIDSLSSSAETRISDGQECPKHSREPVHVSDNSITNSEEDITVPHSVIVKDSGKEASPVDVTASPENCTTEHSPNVNFLVRFAGDTNMSKQRKVETHLNFSSSDIGGTSTDPIHTVSLANVHKTSSLLKGSSVSEVLNPYVQSSDVCLQSRTGGVTVLHGKGEVSETEVYFGNGASNSANRASPLSKINEVTTSHMNVTLLQAELCDAIVVATSCAEAPISISDNKTHQKEVAFSSMVEPSVSLSLPYPERSAKLYNNSLFGGSVESVDANTNIRKFEFSQLQHPSIKCDSLEDLTIRNDQFPVLENEQKENYLPVVPINNIQKDILVSGNTERGKSDIQDVEKCESREFEEKSPSTDLESSDHQTKDDLPLEHQSLPCPAVNDALTTSDCSTVSDVLSPGTMPDMLDNRTSNCQAIQNECVQGDEDNADRRSKVEHDYDLSASTSYSHSQDTKKNIKSSPAARRDNLITGKMMPQPLQVNSKVMTQGLNPSCSELSFGKNHLGSAIPTTFQGRSYLNFPKTKTSAYSAKVSKLRTWHRTDNNSGSLSGKKSLAGSVPPKRSISEKKGNFHDTSYIRKGNNSIVRKHTSVSASPQSTANQSSSLGFDEFHKSTGSEIMVEISNHTNLLKTGLTHAPLERQRTPPLPVDTKLPDHMATVFEENKSSSSIESLSNAFRDSASKSRNFMEPCDAPNSADDALKLDETVENLTVPSDNVESLVEAHDENVSLNSKKIVYVKRKSNQLVATSNSCELSVATDDNVQVASSDGYYKRSKNQLVRTTFESQIYQTVAMPTVNSDGQRARKASGSRRFGKRRSLKDQDSTFFEISAFQFYMGFDPQIVGRSCKPLRASLVWTLCGASTSKNDSESLRHQKVLPHLFPWKRATCLRSFIYNPSLSSNTNSLSAISKKLVLSRKRDTVYTRSTHGFSLRKSKVLGVGGYSLKWSKSIEKSSKKANEEATLAVAAVEKKKRERKDVASIETISSRAKSRKIILSTRISCLLGGQLGERIFRIGSVRYRMDSSGRTLQRISDDEYPPSPSLRSALHVKSSYIPRRLVIGNDEYVRIGNVHQLIRDPKKRTRILANEKIRWSLHTARQRLARKQKYCQFFTRFGKCNKDDRKCPYIHDPSKIVVCTKFLNGLCSAPNCKLTHKINILTSYMAGLCTNRNCPYRHVNVNPKASVCEGFLRGYCADGNEVLSCHVKFSVKLVNNLNVELLLLSPKSGISISLHANVSFLPIWHPIPAPIYKGSCIKTVIYVVSQCRKKHTYVCPTFKATGICTQGTKCKLHHPQKQGKGKKRKRSVDQRNCKRRYFGSLRIDVSEPGTMVVAPRQGEQNKDALEGELTDFISLDDDDEDIAELVGQASEQSTLCDSEPVDIVLDDQDELIKPLLIMKMDIRAQASPV 2241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0257 2241 MobiDBLite consensus disorder prediction 263 305 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 645 662 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 2125 2142 - -
Lele28g0257 2241 ProSiteProfiles Zinc finger C3H1-type profile. 2101 2129 IPR000571 GO:0046872
Lele28g0257 2241 MobiDBLite consensus disorder prediction 626 711 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 1279 1296 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 445 487 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 1278 1302 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 1172 1216 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 663 683 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 41 82 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 1378 1414 - -
Lele28g0257 2241 PANTHER CCCH ZINGC FINGER 343 2038 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 23 168 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 2123 2142 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 125 141 - -
Lele28g0257 2241 ProSiteProfiles Zinc finger C3H1-type profile. 1937 1966 IPR000571 GO:0046872
Lele28g0257 2241 MobiDBLite consensus disorder prediction 258 353 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 98 112 - -
Lele28g0257 2241 MobiDBLite consensus disorder prediction 1175 1210 - -
Lele28g0257 2241 SMART c3hfinal6 2101 2128 IPR000571 GO:0046872
Lele28g0257 2241 SMART c3hfinal6 1966 1990 IPR000571 GO:0046872
Lele28g0257 2241 SMART c3hfinal6 2014 2040 IPR000571 GO:0046872
Lele28g0257 2241 SMART c3hfinal6 1937 1965 IPR000571 GO:0046872
Lele28g0257 2241 Gene3D - 1936 1994 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0257 Lele-ChrLele28 1490502 1500938 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele28g0257 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0235 25 1374007 1383373 Lele28g0257 28 1490502 1500938 hybridization
Lele26g0245 26 1429019 1442771 Lele28g0257 28 1490502 1500938 hybridization