Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0253 ATGTCCCAGTTTGAGGAAATGCAGGAAACCGATGACGAAATCTCAAGGCAATGCCTTTCATGCCAGGATTATTACGTCCCAGGTGACGGCGGCACCTGCAAGGAGTGCTATGAAGAAGCCAACGAGACCGAGGAGGAGCTCAAGAATGAGATCGACGACTTGAAGGCCAAAGTTGCCTTCCTTAGTCTCTTGTCTCCTGTTGATCACCATAATCGCTCCGCTACTGACGTTATTTTGGTTCCCTCCGATGAGAGTTCTGATCTACCCCCTCTGACTGTTCCGGCTCACAAGGCGAGTCGCTCCCCAGTGTTCAGAGCAATGCTTGAAAATGATATGGCGGAAAGACGAAGTGGGACCATAAAGATTAGTGATGTATCATACAATGCTCTTCGGGCCTTTGTGGATTATTTATACACTGCAGAAGCATGCCTTGATGACCAAATGGCCTGTGATCTGTTAGTTTTAGCTGAAAAGTATCAGGTGAAGCATCTCAAGGCGTATTGTGAGAAGCATTTGATGGCGAGATTGAACTGGGAAAAAGCAGTCGCGAATTATGCCTTCGCTCACCAACACAATGCTACCCAATTGCAAGATGCAGCCTTGGCATTAATCACAGACAACATGGACAAGCTTTCAAAGCTTGAGGAGTATGAGGATCTGGTGGAGAGTAACCCTCGTATTATGGTTGAGATCTATGAAGCTTATCTCTCAAAACAGGTTAATACTGCAGCCAGCAAGAAATCTTTCAAAAAGAAATAG 759 0.4585 MSQFEEMQETDDEISRQCLSCQDYYVPGDGGTCKECYEEANETEEELKNEIDDLKAKVAFLSLLSPVDHHNRSATDVILVPSDESSDLPPLTVPAHKASRSPVFRAMLENDMAERRSGTIKISDVSYNALRAFVDYLYTAEACLDDQMACDLLVLAEKYQVKHLKAYCEKHLMARLNWEKAVANYAFAHQHNATQLQDAALALITDNMDKLSKLEEYEDLVESNPRIMVEIYEAYLSKQVNTAASKKSFKKK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0253 252 SMART BTB_4 75 176 IPR000210 GO:0005515
Lele28g0253 252 CDD BTB_POZ_ZBTB_KLHL-like 75 159 - -
Lele28g0253 252 FunFam BTB/POZ domain-containing protein 178 251 - -
Lele28g0253 252 ProSiteProfiles BTB domain profile. 75 146 IPR000210 GO:0005515
Lele28g0253 252 Coils Coil 33 64 - -
Lele28g0253 252 Gene3D Potassium Channel Kv1.1; Chain A 42 177 IPR011333 -
Lele28g0253 252 CDD BACK 185 220 - -
Lele28g0253 252 PANTHER SPECKLE-TYPE POZ PROTEIN 41 243 - -
Lele28g0253 252 Pfam BTB/POZ domain 76 173 IPR000210 GO:0005515
Lele28g0253 252 SUPERFAMILY POZ domain 71 173 IPR011333 -
Lele28g0253 252 Gene3D - 178 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0253 Lele-ChrLele28 1459504 1462010 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele28g0253 BTB 2.9e-17 CL0033