Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0249 ATGCTTCAGGAACAACTTTCCGAGCAACATGGTTACAATGAAAAGGCAAAGCTATTTACCGAAGAGGGGGTCAAAGAAGCCACAGATAACTTCCATGAAAGCAAAATTCTTGGGCGTGGAGGTCAAGGAACAGTTTACAAAGGAACATTACCAGATAACAGAGTGGTTGCCGTGTTCAAGTCCAGAATATCAGAGCAAAGCCAAGTCAAAGATTTCATCAACGAAGTGCCTGTACTCTCACAAAACCACAGGAATGTAGTCAAACTTCTGGGATGCTGTTTAGAAACTGAAGTTCCTCTGCTAATAGTATGTGTGTTGGACGAGAAAAATGTACAGCAACTTAAGCAAGTTGCTGTATTGGCGAGTAGATCTATAAGTGCAAAAGGGGAAGACAGGCCAACCATGAAGGAAGTATCAATTGAGCTAGAAGATCTGATACATCCGTGGAATGGAAAATATTTAAATTCCGAGGAAACTGAATACTTGCTTGCTCCAATATATGGAACTGAAAGTAGTACTAGCAACTCCGTAGGGTTTGAAAGCTTAGGGAACCAACTTGCACTTGAGATGAGAAGTGGACGCTGA 585 0.4171 MLQEQLSEQHGYNEKAKLFTEEGVKEATDNFHESKILGRGGQGTVYKGTLPDNRVVAVFKSRISEQSQVKDFINEVPVLSQNHRNVVKLLGCCLETEVPLLIVCVLDEKNVQQLKQVAVLASRSISAKGEDRPTMKEVSIELEDLIHPWNGKYLNSEETEYLLAPIYGTESSTSNSVGFESLGNQLALEMRSGR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0249 194 Pfam Protein tyrosine and serine/threonine kinase 34 105 IPR001245 GO:0004672|GO:0006468
Lele28g0249 194 SUPERFAMILY Protein kinase-like (PK-like) 14 103 IPR011009 -
Lele28g0249 194 Gene3D Phosphorylase Kinase; domain 1 3 104 - -
Lele28g0249 194 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 106 145 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0249 Lele-ChrLele28 1445257 1446315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0249 105 194 Receptor kinase-like Gene Family AT1G21230 36.458 2.36e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele28g0249 PK_Tyr_Ser-Thr 6.3e-08 CL0016