Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0236 ATGTCTTTAGTTAGATCTGCGGAGCTTCCTACTACACCTTATAGAAATGCCAAGCTCTACTCAATCAAGGGAACTGATGTTAGGCCTGGCTCTCCGTCCCAAATTTTTGGCCCTGATAAGCACAGAACCATGTACATAACAGATTCTTACTCGAGTGAGAGTTACGAGAAGTACTTTCACGATTCACCAACCGAGGAACTGATAGAAACTCCTACTTCCAGCATCTCAGGAAGCTCCCTGCCTGATGGCTCTTCCTATCCGGTTAGAGCTAGTTCAGGAGCTTCTGTGGCTACTAACAACCCGTTTGATATTTCTTTTGTGTCCATGAGACACGGTGATGCCTGTCAGTCCAACTTTGGATCCGATTTCTTGGAAAATGGAAGCCCAGATCCACTTGACTTCGGTGATCAAATGAAATTAAAACTCCAAGAATTAGAGAGGACACTGCTTGGTGATAACAACGATGATTGTGAGGAGGACTTCATACTTGGGACTTTCCAAAGCATGGATATTGATGCTGAGTGGGCTGAACCCATTCAGAATATGCTGCACCATGGCTCACCAAAAGAGTCTTCATCCTCAGATTCTAACCATAGTAGCATTACCAGTATCTCTCCTCGGACCCCAAAGCAATTGCTGTTAGACTGTGCTGGCGTGATTTCAAAAGGAAATGCAGAGGAAGCGTTGTCTATGATAAATGAACTCCGGCAGATGGTATCAATTCAGGGAGATCCTCCCCAGAGGATTGCAGCCTATATGATGGAGGGACTTGCAGCTCGAATAGCTGAATCTGGCAGCAGTATTTATAGAGCACTCAAGTGCAAGGAACCTCCTTCCTCAGACCGACTGGCGGCTATGCAAATACTGTTTGAGGTGTGCCCATGTTTTAAATTTGGATTTATTGCTGCAAATGGTGCAATTACGGAGGCAGTTCAAGATGAAAAGAAGGTTCACATAGTAGATTTTGACATCAATCAGGGAAATCAATACATAACTCTGATACAAACACTTGCTTCAAGGCCAGGTAAGCCACCGCATGTGAGATTGACAGGGGTTGATGATCCCGAGTCGGTCCAGCGAACTGTTGGGGGCCTAAAAATCATTGGACAGAGACTTGAAAAACTGGCAGAAATACTTGGATTGCCATTTGAATTTCGAGCAGTGGCATCGAGGTCTTCCATTGTCACTCCATCGATGCTGGATTGTCGTCCTGGGGAAGCACTTGTGGTGAATTTTGCATTCCAGCTTCATCACATGCTAGATGAGAGCGTTTCAACAGTAAATGAACGAGACCAACTCCTTCGCATGGTGAAGAGCCTGAATCCAAAACTTGTCACCGTTGTTGAACAAGATATGAACACCAACACCCTTCCGTTTTTCCCAAGATTTGTTGAAGCCTACAATTACTACTCGGCCGTGTTTGAGTCGCTGGACGCGACTCTTCCCAGAGATAGTCAGGATAGGATGAATGTTGAAAGGCAATGCCTAGCAAGAGATATTGTCAATATTGTTGCGTGCGAAGGTGAGGGTAGGATTGAACGTTTTGAGGTTGCTGGAAAATGGAGGGCAAGGATGTTAATGGCCGGCTTCACTACATGCCCGATGAGTGCCAATGTGACTGACGCAATTAAGAAACTCATTAAGCAGTATTGTGACAGGTACAAGATGAATGACGTGATGGGGGCACTTCATTTTGGGTGGGAAGACAAGAACTTGATTGTTGCATCGGCGTGGAGGTGA 1740 0.454 MSLVRSAELPTTPYRNAKLYSIKGTDVRPGSPSQIFGPDKHRTMYITDSYSSESYEKYFHDSPTEELIETPTSSISGSSLPDGSSYPVRASSGASVATNNPFDISFVSMRHGDACQSNFGSDFLENGSPDPLDFGDQMKLKLQELERTLLGDNNDDCEEDFILGTFQSMDIDAEWAEPIQNMLHHGSPKESSSSDSNHSSITSISPRTPKQLLLDCAGVISKGNAEEALSMINELRQMVSIQGDPPQRIAAYMMEGLAARIAESGSSIYRALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVQDEKKVHIVDFDINQGNQYITLIQTLASRPGKPPHVRLTGVDDPESVQRTVGGLKIIGQRLEKLAEILGLPFEFRAVASRSSIVTPSMLDCRPGEALVVNFAFQLHHMLDESVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTLPFFPRFVEAYNYYSAVFESLDATLPRDSQDRMNVERQCLARDIVNIVACEGEGRIERFEVAGKWRARMLMAGFTTCPMSANVTDAIKKLIKQYCDRYKMNDVMGALHFGWEDKNLIVASAWR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0236 579 MobiDBLite consensus disorder prediction 185 205 - -
Lele28g0236 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 191 574 IPR005202 -
Lele28g0236 579 Pfam GRAS domain family 210 579 IPR005202 -
Lele28g0236 579 MobiDBLite consensus disorder prediction 66 95 - -
Lele28g0236 579 ProSiteProfiles GRAS family profile. 200 579 IPR005202 -
Lele28g0236 579 MobiDBLite consensus disorder prediction 62 95 - -
Lele28g0236 579 MobiDBLite consensus disorder prediction 183 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0236 Lele-ChrLele28 1376530 1378269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0236 1 579 GRAS Transcription Factor Family AT1G21450 62.331 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele28g0236 GRAS 4.7e-135 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0215 25 1275162 1276901 Lele28g0236 28 1376530 1378269 hybridization
Lele26g0229 26 1321818 1323557 Lele28g0236 28 1376530 1378269 hybridization