Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele28g0204 | ATGAAGACTCCGACCACTCCCCCCGTTTCCCAACCTCCTCAAATGCCTTTGTTTCGCAAATCATCATCTTCTCCCTCACCCACCCCCTCCACGCCTTCATCTATTTCTCCTTCTTCCCTCAAACAAACTGACGTCGATGCCGCTGGTGATGTCTCTAGTCCCGTTCACAGCTCGGAGCAATCAACTCCCCGCCGCCGCCGCCGCCGCCTTACTCGAGCCAGGAAGCTTCGCCACCTTACCGACCATGATGTTGGCCTGCACCTCACTGACGATTCTTCGCTCCCGGCTTCCCCTCCGTCCTCTCGCAAGTCTCGCTCATCGGGCGGTTCCGAACACTGGTCCTCCTCTGCCGTGCCTCAACCCCTGCCGCTTCCCGAATCACCGTTGACTCGCCGAACGGAGTCTACCGTTCCTAATCCCGGACAGTTCCAGCTCGGATCTCCTTCCATAGACCATTCGGGATTTGCTTTCGGGAGGAAGACGGTGGATCACGATGCAGTCATAAACATGAAGTCTTGGAGCCATATGGATAGATCTTGTGATCTAACATCTGCAAACGCGAAGTTTAATCTGAGAGTAAACATCCCGGTTGCAAGTTTCTTGACAGGTCAAAATTCATGTAAAGATCGAGCAATCTCTCATGATATGGACTCTGAAAGTATTTATGACTCAAGATTGCGTGTGGCCCTAAAGAGTGCCCCAACAAGTGTTTTTTCCAGTCCTGTTACCAGTCCGCGGAGATCAAGCAAGGTAGATTTCACTGATCATTTCATTAGTACTCAAGAATTGCATGACAACCCTGTTGGCCATCCTCCAAAAGTGTCACCACACTTGAATGTTCAAAGTCCAGATCGTTCTTCTCTCCGTAGCCCAGGGCGCCATAGTCCTTTCCTCAATCTCAAAATCCAAGATGGATGTCAGCATAGATTTCATTCCAGGGCATGGCCAGAAAATAACCATGCCGATGCACATCCTTTGCCTCTCCCTCTTCCTCCTGGAGCTTCACCACCAGCACAATCATCTGTGCAGTGTCAATCAAGTGCCATGCATCAATTTTCAGGGAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGGGGCACTTTTGGAAGTGTTTATCATGCAACAAACCTAGAGACCGGTGCGTCATGTGCAATGAAGGAGGTGGATATCATTCGAGATGACCCTAACTCTGCCAACTGTATAAAGCAACTAGAGCAGGTTGGTGATCACTTGTGCATTTATATGGAGTATATTCATCCAGGGTCGGTCGATAAATTTGTGCGGGCAAATGGTGAAGCGATGACAGAGTCTGTAGTTCGCAATTTTACACGGCATATTCTCTCAGGGTTGGCTTACTTGCACAGTACCAAAACTATCCATAGGGACATCAAAGGAGCAAACTTACTTGTTGATGCATCAGGCACCGTCAAGCTTGCTGATTTTGGAATGGCAAAAGTTGTGAGTGTTCTAGACTTACTGGTTCTAAACTCAATTTACCTATGTGTCCAGAAACGTGCAATGCTAACAGGGCAATCATATGCCCTTTCCTTAAAGGGCAGTCCATACTGGATGGCTCCTGAGGTCATGAAGGCTGCCATGATGAAAGATGACAATCCTTACCTTGTCTATGCTATTGATATCTGGAGCTTAGGTTGCACTATCATAGAGATGCTGACAGGAAAACCTCCTTGGAGTGACTTTGAAGGGCCTCAAGCCATGTTCAAGGTACTGCACAATGCGCCACCGATACCAGAAACATTATCTTCAGCAGGAAAGGATTTTCTTCAGAGATGTTTTGAAAGGGATCCTGCAAATCGACCATCAGCTGCAAGGCTTCTTGAGCACGCCTTTGTTCAAAATTTGCATGATCAGGTTGTTTTTGCTCACCCACAATCATATCCTAGAGAAGACCCTGAAGATAATTCACGTTGTCCCAAAGACACCACTACACAGAACCGTGATGTGATTCGAGCCTCCATGGGCTCCCGGTTCATCAACAAAATCCAGAAACTGATCGGTGATTCTTCCCAACAATATAATGCTGAGGATTCTAAATATTCTACATCTCATTACTCTCCTTACTCTCTGCCAGAAGTTAAAATTCCTAAGTCGTCCTTGAAACCAGCTGCCCTCAATTACGTTTCTGCTTCAAAATCCACCAACATAGTCCCTCGCTGTAATGAGATTCGTCACGCACCTTTCATTCCATCTTATTTACCATCATGGAGGCTGGGATTTACAAGCTGCTCATTCATGGTCACAAATATATCAATCTCAAGGGGCAATAGAGAGCGAAAAGTTCACAATTACTTGTACCAATAA | 2325 | 0.468 | MKTPTTPPVSQPPQMPLFRKSSSSPSPTPSTPSSISPSSLKQTDVDAAGDVSSPVHSSEQSTPRRRRRRLTRARKLRHLTDHDVGLHLTDDSSLPASPPSSRKSRSSGGSEHWSSSAVPQPLPLPESPLTRRTESTVPNPGQFQLGSPSIDHSGFAFGRKTVDHDAVINMKSWSHMDRSCDLTSANAKFNLRVNIPVASFLTGQNSCKDRAISHDMDSESIYDSRLRVALKSAPTSVFSSPVTSPRRSSKVDFTDHFISTQELHDNPVGHPPKVSPHLNVQSPDRSSLRSPGRHSPFLNLKIQDGCQHRFHSRAWPENNHADAHPLPLPLPPGASPPAQSSVQCQSSAMHQFSGKGQWQKGKLIGRGTFGSVYHATNLETGASCAMKEVDIIRDDPNSANCIKQLEQVGDHLCIYMEYIHPGSVDKFVRANGEAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGMAKVVSVLDLLVLNSIYLCVQKRAMLTGQSYALSLKGSPYWMAPEVMKAAMMKDDNPYLVYAIDIWSLGCTIIEMLTGKPPWSDFEGPQAMFKVLHNAPPIPETLSSAGKDFLQRCFERDPANRPSAARLLEHAFVQNLHDQVVFAHPQSYPREDPEDNSRCPKDTTTQNRDVIRASMGSRFINKIQKLIGDSSQQYNAEDSKYSTSHYSPYSLPEVKIPKSSLKPAALNYVSASKSTNIVPRCNEIRHAPFIPSYLPSWRLGFTSCSFMVTNISISRGNRERKVHNYLYQ | 774 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele28g0204 | 774 | Pfam | Protein kinase domain | 408 | 618 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele28g0204 | 774 | ProSitePatterns | Protein kinases ATP-binding region signature. | 364 | 387 | IPR017441 | GO:0005524 | |
| Lele28g0204 | 774 | MobiDBLite | consensus disorder prediction | 15 | 46 | - | - | |
| Lele28g0204 | 774 | MobiDBLite | consensus disorder prediction | 129 | 149 | - | - | |
| Lele28g0204 | 774 | Gene3D | Transferase(Phosphotransferase) domain 1 | 351 | 693 | - | - | |
| Lele28g0204 | 774 | MobiDBLite | consensus disorder prediction | 93 | 117 | - | - | |
| Lele28g0204 | 774 | MobiDBLite | consensus disorder prediction | 262 | 294 | - | - | |
| Lele28g0204 | 774 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 24 | 632 | - | - | |
| Lele28g0204 | 774 | MobiDBLite | consensus disorder prediction | 279 | 293 | - | - | |
| Lele28g0204 | 774 | MobiDBLite | consensus disorder prediction | 1 | 150 | - | - |
Showing 1 to 10 of 14 entries
Duplication type information
Functional genes information
Transcription factors information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele01g0945 | 01 | 5453411 | 5455573 | Lele28g0204 | 28 | 1195792 | 1200496 | CCT | |
| Lele02g0947 | 02 | 5740719 | 5742932 | Lele28g0204 | 28 | 1195792 | 1200496 | CCT | |
| Lele03g0942 | 03 | 5470399 | 5472958 | Lele28g0204 | 28 | 1195792 | 1200496 | CCT | |
| Lele04g0939 | 04 | 5783040 | 5785213 | Lele28g0204 | 28 | 1195792 | 1200496 | CCT | |
| Lele25g0191 | 25 | 1136985 | 1141998 | Lele28g0204 | 28 | 1195792 | 1200496 | hybridization | |
| Lele26g0199 | 26 | 1174590 | 1179257 | Lele28g0204 | 28 | 1195792 | 1200496 | hybridization |
Showing 1 to 6 of 6 entries