Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0194 ATGCACTCAATGGAAGGAACATTTGGTGATATTTTCAGCTTCGACAGTGAATTCCTGGAGCTCGCTCGCTGCTTCGACTCTCAGGCCTACGCGAGAACACGGTTTCTCGACCTTTGTTGGCTCATTTTTGTTGCCCCAATGCTTGTAGATATCACTATAGACTATAATGTGGGGAAAGCGAAGACGAGTTCTAAGAGATACAAAAGTGTGGAAAACTCAACGATTGAATGGGGAGAAAGCAAATGGAGCTTTTCTGATAATTACTTGCTTCAGTTGCTTAAACAACTTCATGGTATCTTACGGGTTGCACTGCCAAGGAATTTTTCAGATAATTTGAGGACGAAACTGCCAGATAATGTGACTCTGAAAGGTCCTGGTGGCGATGAGTGGAGTGTTGGATTGACTACCAGAAATGATACCTTGCACTTCACGCATGGCTGGCAACAATTTGTTAAAGATCACTGTTTGGAAGAGAATGATCTGTCCTAA 489 0.4294 MHSMEGTFGDIFSFDSEFLELARCFDSQAYARTRFLDLCWLIFVAPMLVDITIDYNVGKAKTSSKRYKSVENSTIEWGESKWSFSDNYLLQLLKQLHGILRVALPRNFSDNLRTKLPDNVTLKGPGGDEWSVGLTTRNDTLHFTHGWQQFVKDHCLEENDLS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0194 162 CDD B3_DNA 101 160 IPR003340 GO:0003677
Lele28g0194 162 Gene3D - 83 162 IPR015300 -
Lele28g0194 162 SUPERFAMILY DNA-binding pseudobarrel domain 100 160 IPR015300 -
Lele28g0194 162 ProSiteProfiles B3 DNA-binding domain profile. 101 162 IPR003340 GO:0003677
Lele28g0194 162 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 102 160 IPR044837 -
Lele28g0194 162 Pfam B3 DNA binding domain 101 160 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0194 Lele-ChrLele28 1139833 1142783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0194 92 161 REM Transcription Factor Family AT4G33280 47.887 1.95e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele28g0194 B3 1.8e-09 CL0405