Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0188 ATGATCTCCCCCACATCCATGTTCATAAAGCACTCCCTTCTGATCCTTTTACTCGTGTTTCTCCTCCCCCTGATCACGGCCCAATCTAACCGCCACCACTGCCAACGGGCATGCCCCCCGCAGCACTCCCTCCGGAGCCTCCCTTACGCCTTTGGCTTCTCTTCCGGCTGCGCAATCCGACTCAACTGCACCCCCTCCGGTAGAATCCTCATCGGAGATTACCCGGTACACTCTATTAACTCCGATACCATAATAGTCGGCATCAAATCCCGATGCAATCGCCCGTTTGATACCTTCCGTCAACTCTTCGGCCACAGATACGCGCCCACGTCGCGAAACGCCATCCTCTTGCAAAATTGCAGTGAAAAGGTCTCCCCATGCGTCATCCCGGCGACCATGGTGCGGACTCACTTCGAGTCGGAAAACTGCAGCTCCGGCGGTGGCAATTTGAGTTGCTATTACGAAAGCTCTACGGTTGATTTTATAAACCTCCGGAATTTAACTAACAAACGCTGTCAGTACCTTATGTCGTCGATAGCAGCAGAGGATTTAAGGAAAAATTCGGATATCAGCGCAGTGACGGCGGTGTCCTTGGAGGTTGAGACGATTGAGCTGGGATGGTGGCTGGAAGGAGACTGCCAATGTTCCCTTGATGCCAATTGTACGAGACTAAAATCGCCGACCGATAAGAAGCGGGGGTATCGGTGCCGTTGCAAAGAAGGATTCACGGGCGACGGGTATTTAGCCGGAAGTGGTTGCCGGAAAGCCTCTTCATCCTGTGACCCTGCAAAGTACATGTCCGGCCAATGTGGAGGGACAACCAGATTCGTTGTCTTAATTGGAGGGATGGTCTTTGGAGCTTCATTAATGATCGGTTTGGGTCTAATATGTTGTTTCTTTCGGCGGCGCTCCAAATTTAGAGTCACAAAGAGCACAAAAAGGCGCCTGACTGAAGCTACCAGCAATTACAGCGTTCCTATTTATACCTACAAAGACATTGAGAGAGCCACGAATAATTTCTCAGAGAAACAGAGGCTTGGAACCGGGGCATATGGGACTGTTTATGCTGGAAAACTTCACAATGACGAATGGGTTGCCATTAAAAGGATCAAATACAGAGACACTGACAGCATCGAGAAAGTAATGAACGAGATCAAGCTCATTTCCTCTGTAAGCCATCCCAATCTAGTCCGCTTGTTGGGTTGCTCTCTCGAATATGGAGAACAAATCCTTGTTTATGAGTTCATGCCCAGTGGAACGTTAAATCAACATCTGTTAAGGGAGAGAGGGACGGGACTTCCATGGCCTGTTCGACTCACTATTGCTGCCGAGACAGCACAAGCCATAGCACATCTCCACTCTGCCATCAATCCCCCCATTTACCACAGAGACATCAAGTCAAGCAACATATTGTTGGACAACAGTTTTAGATCCAAAGTTGCAGATTTTGGTCTCTCCAGACCTGGGATGACCGAAATATCTCACATTTCTACTGCCCCACAAGGAACGCCTGGCTACGTTGATCCACAATACCATCAAGATTTTCACCTTTCCGATAAAAGCGACGTTTATAGTTTTGGGGTCGTTCTTGTTGAGATCATAACAGGATTGAAAGTGGTGGATTTTACTCGTCCCCAGAATGCGGTGAATTTGGCTTCTTTTGCTACAGACAAGATTGGGAAGGGGCTTTTGGATGAGATTATAGATCCATTCCTCGAATCGCATATGGATGATTGGACCCATTTCTCCGTACACAATACAGCAGAGCTAGCATTTCGATGCCTCGCATTCCACAGGGACATGAGGCCTTCAATGACAGAAGTTGCTGCTGAGCTTGAGCAGATCAGACTGAGTAGGTGGACAACCTTTGAAGACAGCAATCGTATAGCCTCAACAGAGTTGTCCTCGTCTTCTCCTTCCTCTGATGAAAGTGAGAAACCTCTGAGTGTCAAAATAAAGGAGGTGGGACCACCGGAGGGCGAAGGGCCTCTCAAGTTTCAGACTGAGCCAGCCTCGTTAAATTCAATGGAAAGGCCCAAGAACTGTTCTCCAGTCTCAGTGCAAGACCCAGACTTTTGGCTGAGCGAACAGAGCTCTCCTTCATCCAATAGTCTGTTGAGTAAATCATTCGAGTGA 2136 0.485 MISPTSMFIKHSLLILLLVFLLPLITAQSNRHHCQRACPPQHSLRSLPYAFGFSSGCAIRLNCTPSGRILIGDYPVHSINSDTIIVGIKSRCNRPFDTFRQLFGHRYAPTSRNAILLQNCSEKVSPCVIPATMVRTHFESENCSSGGGNLSCYYESSTVDFINLRNLTNKRCQYLMSSIAAEDLRKNSDISAVTAVSLEVETIELGWWLEGDCQCSLDANCTRLKSPTDKKRGYRCRCKEGFTGDGYLAGSGCRKASSSCDPAKYMSGQCGGTTRFVVLIGGMVFGASLMIGLGLICCFFRRRSKFRVTKSTKRRLTEATSNYSVPIYTYKDIERATNNFSEKQRLGTGAYGTVYAGKLHNDEWVAIKRIKYRDTDSIEKVMNEIKLISSVSHPNLVRLLGCSLEYGEQILVYEFMPSGTLNQHLLRERGTGLPWPVRLTIAAETAQAIAHLHSAINPPIYHRDIKSSNILLDNSFRSKVADFGLSRPGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFTRPQNAVNLASFATDKIGKGLLDEIIDPFLESHMDDWTHFSVHNTAELAFRCLAFHRDMRPSMTEVAAELEQIRLSRWTTFEDSNRIASTELSSSSPSSDESEKPLSVKIKEVGPPEGEGPLKFQTEPASLNSMERPKNCSPVSVQDPDFWLSEQSSPSSNSLLSKSFE 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0188 711 FunFam Wall-associated receptor kinase-like 14 307 415 - -
Lele28g0188 711 ProSiteProfiles Protein kinase domain profile. 340 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0188 711 Gene3D Transferase(Phosphotransferase) domain 1 416 635 - -
Lele28g0188 711 MobiDBLite consensus disorder prediction 668 711 - -
Lele28g0188 711 Pfam Protein kinase domain 340 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0188 711 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 654 IPR044652 GO:0004672
Lele28g0188 711 MobiDBLite consensus disorder prediction 631 711 - -
Lele28g0188 711 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Lele28g0188 711 SUPERFAMILY Protein kinase-like (PK-like) 316 613 IPR011009 -
Lele28g0188 711 Gene3D Laminin 213 248 - -
Lele28g0188 711 SMART serkin_6 340 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0188 711 FunFam Wall-associated receptor kinase-like 20 416 625 - -
Lele28g0188 711 MobiDBLite consensus disorder prediction 631 645 - -
Lele28g0188 711 Gene3D Phosphorylase Kinase; domain 1 301 415 - -
Lele28g0188 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0188 Lele-ChrLele28 1095806 1099602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0188 5 706 Receptor kinase-like Gene Family AT2G23450 50.420 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele28g0188 Pkinase 1.7e-41 CL0016