Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0187 ATGGCTTCCTCTATCTTCTACCCCCCTTTCCTCCACCTTCAATCTCCTCCCCCCTCCTTTTCCCCTCCCTTTTCCCCTCGTCCCATCCGAGCCTCCGCCTCCCTCCCCCGGCTGTCGGTGGCCGCTCATGATGCCCCCAAGCTTCCTCTTCGCAAGATCCCCGGCGAATATGGCATCCCTCTCATTGGTCCGTACAAGGATCGACTCGACTACTTCTACAACCAAGGTCGCGACGAATACTTCAAATCCCGCATCCACAAGTATCAATCAACCGTGTTCCGCACCAATATGCCCCCTGGACCCATGATTGCTCCCAACCCCCAAGTCGTTGTCTTGCTGGACGGCAAGAGTTTCCCCGTCCTCTTCGATGTGGCCAAGGTTGACAAGAAAGATCTCTTCACCGGCACCTACATGCCTTCCACCGAACTCACCGGCGGCTACCGAGTTCTCTCCTATCTCGACCCCTCCGAGCCCAAACACGGCCTCCTCAAGCGCCTCATGTTCTTCCAACTTAAGTCTCGCCGCGACCACGTCATCCCCGAGTTCCATTCCTCCTACACCGCCCTCTTCGAGACCCTAGAAAGCGAGCTCGCCGCCAAAGGGAAAGCGAATTTCGGAGACGCCCACGATCAGGCCGCCTTTAACTTTCTGGCTCGCGCCCTTCACGGCTCTAACCCTGCGGACACCAAGCTGGGACTGGACGGCCCAAAGCTCGTTCAGAAATGGGTTCTGTTCCAACTCAGTCCTATCCTGAACATGGGCCTTCCCAAGCTCATCGAAGACTCTATATTCCACAGCGTCCGTCTCCCTCCGTTCTTGGTGAAAGCCGATTACCAGAGGCTGTACGATTTCTTCTACGCGTCCTCCGGGTTCGTGCTGGACCAAGCAGAGCGGCTGGGAGTGTCGAGAGAAGAAGCCTGCCACAACCTCCTATTTGCCACGTGCTTCAATGCCTTTGGAGGAATGAAGCTCTTCTTCCCGAACGTAGTGAAGTGGATCGGTAGAGCAGGGGTACAACTGCATACGCAGTTAGCGGAGGAGATCCGATCGGCGGTGAGATCGAAGGGCGGACGGGTGACGATGGAAGCGATGGAACAGATGCCACTGATGAAATCGGTGGTGTACGAAGCGTTCAGGATAGAGCCGCCGGTGCCGCTACAGTACGGGAGGGCAAAGCGAGACTTGGTGATAGAGAACCACGAGAACAGATTCCAAGTGAAGGAAGGGGAGCTCTTATTCGGGTATCAGCCGTTCGCGACCAAGGATCCCAAGATATTCGAGAGAGCAGAAGAGTTCGTTGGGGATCGATTTGTGGGGGAAGGGGAGAAATTGCTGAAGCACGTGCTGTGGTCGAATGGGCCGGAGACAGAATCTCCGACGGTGGGGAACAAACAATGTGCGGGGAAGGATTTTGTAACGTTGGTGGCGAGATTGCTAGTGGTGGAGCTGTTCCTCCGATACGATTCATTCGATATCCAAGCGGGAAAGTCTGCCTTGGGTTCCTCCATAACCGTCACATCTCTCAAGCGAGCCAGCTTCTAG 1542 0.5577 MASSIFYPPFLHLQSPPPSFSPPFSPRPIRASASLPRLSVAAHDAPKLPLRKIPGEYGIPLIGPYKDRLDYFYNQGRDEYFKSRIHKYQSTVFRTNMPPGPMIAPNPQVVVLLDGKSFPVLFDVAKVDKKDLFTGTYMPSTELTGGYRVLSYLDPSEPKHGLLKRLMFFQLKSRRDHVIPEFHSSYTALFETLESELAAKGKANFGDAHDQAAFNFLARALHGSNPADTKLGLDGPKLVQKWVLFQLSPILNMGLPKLIEDSIFHSVRLPPFLVKADYQRLYDFFYASSGFVLDQAERLGVSREEACHNLLFATCFNAFGGMKLFFPNVVKWIGRAGVQLHTQLAEEIRSAVRSKGGRVTMEAMEQMPLMKSVVYEAFRIEPPVPLQYGRAKRDLVIENHENRFQVKEGELLFGYQPFATKDPKIFERAEEFVGDRFVGEGEKLLKHVLWSNGPETESPTVGNKQCAGKDFVTLVARLLVVELFLRYDSFDIQAGKSALGSSITVTSLKRASF 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0187 513 FunFam Allene oxide synthase, chloroplastic 48 513 - -
Lele28g0187 513 Pfam Cytochrome P450 342 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0187 513 SUPERFAMILY Cytochrome P450 49 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0187 513 Gene3D Cytochrome P450 44 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0187 513 PANTHER CYTOCHROME P450 26 48 487 - -
Lele28g0187 513 PRINTS E-class P450 group IV signature 420 438 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0187 513 PRINTS E-class P450 group IV signature 466 484 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0187 513 PRINTS E-class P450 group IV signature 367 383 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0187 Lele-ChrLele28 1092929 1094470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0187 27 513 Cytochrome P450 AT5G42650 67.959 0.0 685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0174 25 1053325 1054881 Lele28g0187 28 1092929 1094470 hybridization
Lele26g0184 26 1077747 1079306 Lele28g0187 28 1092929 1094470 hybridization