Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0180 ATGGGGAATCAACCTGGTAAAGGATTTTGCGGACTGAAAACGAGGATGAGGAGAGAGCCAAAGGGTTTCATTCATCACCAGGCTTCCCCGTCGCACGTAGGGATAAGAACGGTGGATGTTGATGAAGTTAGTAACTTGTTCACCGGTTCAGATCTCTGCATCTCCATAGTGACTTGGAATATGAACGGCCAGGTTACCTTTGAGGATCTAGCAGAGATGGTCGGGGACAACTGTGAGTTTGATCTTCTAGTCATTGGCTTGCAGGAGGCTCCGCGAAACCAAGTTGCAAAGATGCTGAAAGTAGCTCTCGTTGATACTCATATCCTGATAGGTAAAGTTACCATGCAGTCTTTACAGTTGTACCTGTTCGGGCCCAAGAATGCTGGATCATTAATTAGAGAATTCAAGGTGGACAGACAATCAGTAGGAGGCTGCGGAGGAATAATTGGAAGGAAGAAAGGGGCAGTGGCAATCTGGATTAACTACAAATCCATAAGGATGGTGTTCATTTCTTGCCATCTCTCAGCTCATGCGCGCAGAGTAGAAGAAAGGAATTCAGAATGCAGGCACATATCACACTCACTCTTCTCCAAGAATTGGAATCCATATGCCAGACCAGCACACGTCACTGTTTGGATGGGGGATCTCAACTACAGGCTACAAGGCATTGATACCTACCCGGCCAGGGCTCTCATCCAAATGGACCTCCACAAGCTGCTTGGCAAAGATCAGCTCTTACAGGAGGCTGGACGAGGACAGATTTTCAATGGGTATTATGAGGGCACATTGACATTCAGGCCAACTTACAAGTATAATGTCGGAAGTAGCAACTATGATACCAGTTATAAGGTGAGGGTGCCGGCTTGGACAGATCGTATATTGTTCCACGTAGAGGACGAAGATAAGATGGAAGCAATCTTACACTCGTATAATTCAATGGATGAAATAAACGGTTCTGATCACAAGCCAGTGAAGGCTCGACTGTGCTTAAGACTTCGTCAAACCTCCCCGCTACTTGAGATTCTGCGTTTATTAAGAGGTAGAAATTAA 1050 0.4581 MGNQPGKGFCGLKTRMRREPKGFIHHQASPSHVGIRTVDVDEVSNLFTGSDLCISIVTWNMNGQVTFEDLAEMVGDNCEFDLLVIGLQEAPRNQVAKMLKVALVDTHILIGKVTMQSLQLYLFGPKNAGSLIREFKVDRQSVGGCGGIIGRKKGAVAIWINYKSIRMVFISCHLSAHARRVEERNSECRHISHSLFSKNWNPYARPAHVTVWMGDLNYRLQGIDTYPARALIQMDLHKLLGKDQLLQEAGRGQIFNGYYEGTLTFRPTYKYNVGSSNYDTSYKVRVPAWTDRILFHVEDEDKMEAILHSYNSMDEINGSDHKPVKARLCLRLRQTSPLLEILRLLRGRN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0180 349 SUPERFAMILY DNase I-like 48 332 IPR036691 -
Lele28g0180 349 Pfam Endonuclease/Exonuclease/phosphatase family 57 321 IPR005135 GO:0003824
Lele28g0180 349 Gene3D Endonuclease/exonuclease/phosphatase 33 341 IPR036691 -
Lele28g0180 349 PANTHER INOSITOL 5-PHOSPHATASE 50 335 - -
Lele28g0180 349 FunFam Type IV inositol polyphosphate 5-phosphatase 11 32 337 - -
Lele28g0180 349 SMART i5p_5 50 336 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0180 Lele-ChrLele28 1051228 1056410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0180 58 332 Acyl Lipid Metabolism Gene Families AT2G43900 28.736 1.20e-24 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0169 25 1025415 1027832 Lele28g0180 28 1051228 1056410 hybridization
Lele26g0177 26 1038069 1046962 Lele28g0180 28 1051228 1056410 hybridization