Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0176 ATGCTGGGCCCGATCGAAATCCATTCCAAAAGTGTACAAAACAAAGCCATTCCCTCTGAGCTTCACCAATCACGATGTGCGGTTCCCGAACGCTCCACCTCCTTTGATGCCTCCCCAAACAATATCCCAGTATCAGCCTCAGAACTCCTTGGTTTTCTGCTTTTCTCAGCTAATGTTGTTTTTTCACCGAAGGAACATTTTCAGCTCAGAGAAGGGAGGTTTTCCAACAGTTCCTTGAAGAAGATGGAAGTTTCCAGGCCTCTCAAAAGTGATTGTAGATTAAAGCACCGTTCTCTGACCCCTATTAGGATTTTAAGGGGTGTGTTATGTTTAGTGGTGTTTATTTCTACAGCTTTTATGTTTTTAGCCTATTTTACACCTGTGGCAGCTGTATTAATGCGGCTTTTCAGTGTGCGTTGTAGTAGGAAGGCCGTTTCATTCCTCTTTGGACTTTGGCTAGCCCTATGGCCCTCTTTATTTGAAAAGATAAACAAAACGAAAGTGGTCTTTTCTGGAGATAGTATTCCGATGAAGGAACGTGTTTTACTTATTGCAAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGAATCTAGCACTCCGAAAGGGAAGTCTGGGCTACATAAAATACATTCTTAAGAGCAGCTTGATGAAGCTGCCTATCTTCGGTTGGGGATTTCACATTCTGGAGTTCATTGCAGTAGAGAGGAAGTGGGAGATAGATGCGCCAATATTACTCAGTTCGCTTTCCACATTAAAGAACAGTCAAGATCCTCTGTGGCTAGCCATTTTCCCCGAAGGAACTGATTATACCGAAGAGAAGAGCAAAAAGAGTCAAAATTATGCAGCTGAAGTTGGACTTCCTGTGCTAAAAAACGTGCTACTTCCAAAAACTAAAGGTTTCTATGCTTGCTTGGAAGTTCTACGAGACTCACTGGATGCAGTATATGATGTGAGCATTGCGTACAGGAATCAATGTCCTTCTTTTCTGGACAATGTATTCGGGGTCGATCCTTCAGAAGTGCACGTACATGTTCGGCGAATCCCTGTTGATGACATTCCAGCTTCCGAAACCAAAGCTGCTTCTTGGCTAATGAATGCGTTCCAGATCAAGGACCAGTTGCTTTCTGATTTCTACATTGAAGGCCAATTCCGTAACCAACTAAATGAAAGGGAACTTTCCACGTTCAAGTGCCTGGTTACTTTTGGTGTGGTGGTTTCTTTGACTGCCGTGTTCACTTATCTTACATTTTTTTCTCTCATTTGGTTCAGGGTGTATGTAGGCCTGTCTTGTGTATATCTTGCTAGTGCTACGTGCTTCAAACTGAAATTGATTCCACTTGCAGACTATGTCAATGAACTCTTCTACGGCAAGAAACAAAAGAGTGAATAA 1395 0.4251 MLGPIEIHSKSVQNKAIPSELHQSRCAVPERSTSFDASPNNIPVSASELLGFLLFSANVVFSPKEHFQLREGRFSNSSLKKMEVSRPLKSDCRLKHRSLTPIRILRGVLCLVVFISTAFMFLAYFTPVAAVLMRLFSVRCSRKAVSFLFGLWLALWPSLFEKINKTKVVFSGDSIPMKERVLLIANHRTEVDWMYLWNLALRKGSLGYIKYILKSSLMKLPIFGWGFHILEFIAVERKWEIDAPILLSSLSTLKNSQDPLWLAIFPEGTDYTEEKSKKSQNYAAEVGLPVLKNVLLPKTKGFYACLEVLRDSLDAVYDVSIAYRNQCPSFLDNVFGVDPSEVHVHVRRIPVDDIPASETKAASWLMNAFQIKDQLLSDFYIEGQFRNQLNERELSTFKCLVTFGVVVSLTAVFTYLTFFSLIWFRVYVGLSCVYLASATCFKLKLIPLADYVNELFYGKKQKSE 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0176 464 SMART plsc_2 181 303 IPR002123 GO:0016746
Lele28g0176 464 CDD LPLAT_LCLAT1-like 159 347 - -
Lele28g0176 464 Pfam Acyltransferase 170 323 IPR002123 GO:0016746
Lele28g0176 464 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 118 291 - -
Lele28g0176 464 Pfam Acyltransferase C-terminus 335 398 IPR032098 -
Lele28g0176 464 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 99 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0176 Lele-ChrLele28 1032173 1035825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0176 82 447 Miscellaneous Gene Families AT1G75020 66.667 0.0 510
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0165 25 1006103 1007779 Lele28g0176 28 1032173 1035825 hybridization
Lele26g0174 26 1022230 1024523 Lele28g0176 28 1032173 1035825 hybridization