Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0170 ATGCATTTAAGATTAAGAAATATCTTGGAAGTAACGAGGACTCGTAAGAAAAAGCAAGAATTTGTTTATAACGCTTTAGCAGTGAGTGACACAGCGAGCGTCTTCTTCCTCTTCGTCTTGGTCTCCAAACATTCGTTGCTGGTCTTCCTCTGTCCTGTTTTACCGTCCATTCGTTTCTCATCGTTCGCGATTAGGAATTGCTGTGTGCTAAGTTTCTCTAGTTCTCTTTGTCTTGCTGTTGCGTTGCTGCTGCTCTTGGACTTTCCGATGGCCATACTCTTCCATTCTTTACTTGTGAGTTCTGCATTTTTTTCTCATGCTCTCTCTCTCTCTCTCTGTGTCCTCACAGTTTTGCGCTCTGGTCCTCCGCTGTTTTTTTCTTTAGGAAAGATGAAATTTAGATCTAAGAAAGGATGGAAGACTTTGGTACCTCTTCATTTGAAGGGTAAATCAGCACTCCGTTTTTCTCTGTTCCCCAAAGTCAATTCAAATAGCTATGGTCCTGGCGAAACTCCAGTTTATCTGAATGTATATGATTTGACGCCAATGAATGGTTATATGTACTGGACTGGCCTAGGTATCTATCACTCTGGTGTCGAAGTATATGGTGTAGAATATGCATTTGGAGCTCATGACTATCCAACTAGCGGTGTCTTTGAGGTGGAACCTCGGCAATGCCCTGGATTCAAGTTCAGGAAGTCAATATTCATAGGAACCACCTGTCTAGATCCTTTACAGGTCAGGGAGTTCATGGAACGCCAGTCAACAAACTACAATGGTGATACATATCACTTAATTGTGAAGAATTGCAACCATTTCTGCAAGGACATCTGTTACAAGCTGACAGGGAAGTCAATTCCAACATGGGTTAATCGACTGGCCAACCTAGGTTCAGTTTGCAATTGCGTTCTTCCAGAAGCACTCAGAATTTCTGCTGTGAGGCATGATCCTAATTTCCAGACTCGCGAGAGTGAAAAAAGAAGGCTGCGAAGCGCCGTCAATTGTCTGTCCTCAATCTCAATGCGGCAAAAGCACTTATCAACCTCTTCACTGTTTCTACAGTCACCCCTAAGAGGCTGCTTATCGTCATGGGAATTTAGGAAGTCCATTAAAGAAAGTTAA 1122 0.4278 MHLRLRNILEVTRTRKKKQEFVYNALAVSDTASVFFLFVLVSKHSLLVFLCPVLPSIRFSSFAIRNCCVLSFSSSLCLAVALLLLLDFPMAILFHSLLVSSAFFSHALSLSLCVLTVLRSGPPLFFSLGKMKFRSKKGWKTLVPLHLKGKSALRFSLFPKVNSNSYGPGETPVYLNVYDLTPMNGYMYWTGLGIYHSGVEVYGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSIFIGTTCLDPLQVREFMERQSTNYNGDTYHLIVKNCNHFCKDICYKLTGKSIPTWVNRLANLGSVCNCVLPEALRISAVRHDPNFQTRESEKRRLRSAVNCLSSISMRQKHLSTSSLFLQSPLRGCLSSWEFRKSIKES 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0170 373 PANTHER DESUMOYLATING ISOPEPTIDASE 169 350 IPR008580 GO:0008233
Lele28g0170 373 Gene3D PPPDE domains 167 319 IPR042266 -
Lele28g0170 373 Pfam PPPDE putative peptidase domain 172 307 IPR008580 GO:0008233
Lele28g0170 373 ProSiteProfiles PPPDE domain profile. 171 308 IPR008580 GO:0008233
Lele28g0170 373 SMART DUF862_2a 171 309 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0170 Lele-ChrLele28 980290 986595 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0156 25 953125 956177 Lele28g0170 28 980290 986595 hybridization
Lele26g0167 26 965063 969005 Lele28g0170 28 980290 986595 hybridization