Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0148 ATGAGTGGGATGGCGAGGCTCACTGATTGCTCATATGAAAGAGGGAAAAAGACAAGAAGAAAACGTGTGGGATCTGCAAGTAGTGCACGAGAAGAGATAGAGCAGGGCAAGCCTAAAGTAGACGGGATTAGTGCTCTGATCACATTGCTTTCTCCAGTTGTTGCTTTCACTCAATGTGAAGGAAATAAAGCATTAATTATTCGTTACTTTCGGTTGCCTACACTGCTAGCACGAGCAGCGAGTTCTTCATCACTCTCAAGTATAAAAAGGGGAACAATGCGGAAGACTTCTTCAATGGCGTCAAGCTCCAGTAACTGGACGAGGAAGCAGAACAAGAGGTTCGAGAATGCTTTGGCAATGTACGAGGAAGACAGCCCAGATCGATGGCAGAAGCTGGCAAGGGCGGTGGGAGGGAAGACGGAGGAAGAAGTGAAGATGCATTACGAGAAGCTTGTGCAAGACCTCAGGCAGATTGAGGAAGGTCAAGTGCCCTTGCCCAATTACATAGTACCCTTCAATTGCATGGATGAACACCAAAGATGA 543 0.4696 MSGMARLTDCSYERGKKTRRKRVGSASSAREEIEQGKPKVDGISALITLLSPVVAFTQCEGNKALIIRYFRLPTLLARAASSSSLSSIKRGTMRKTSSMASSSSNWTRKQNKRFENALAMYEEDSPDRWQKLARAVGGKTEEEVKMHYEKLVQDLRQIEEGQVPLPNYIVPFNCMDEHQR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0148 180 CDD SANT 105 152 IPR001005 -
Lele28g0148 180 MobiDBLite consensus disorder prediction 1 35 - -
Lele28g0148 180 FunFam Transcription factor SRM1 98 165 - -
Lele28g0148 180 SMART sant 102 154 IPR001005 -
Lele28g0148 180 Gene3D - 96 165 - -
Lele28g0148 180 ProSiteProfiles Myb-like domain profile. 98 152 IPR001005 -
Lele28g0148 180 Pfam Myb-like DNA-binding domain 104 151 IPR001005 -
Lele28g0148 180 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 93 168 IPR044636 GO:0003700
Lele28g0148 180 SUPERFAMILY Homeodomain-like 105 159 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0148 Lele-ChrLele28 846049 848551 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele28g0148 Myb_DNA-binding 1.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0150 26 840797 842523 Lele28g0148 28 846049 848551 hybridization