Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0140 ATGGGTTGGACGAGAGAAGAGAACAGAAGATTTGAGGATGCGCTTGCAGTGTATGGGCCGGAGGACCCAGATAGGTGGCAGCATGTGGCGAACGCGGTGGCCGGAAAATCGGCACAAGAAGTGAAAAGGCACTATGAGATCCTCATGGAGGACGTCAGTCGAATTGAGCGTGATCAAGTCCCTTTACCCAGATACGTTCACTCCAGGCGAACTGCCCAACACGAGCCCTGCGGGATGATGAGGAATCTAAATCTTCGTTGA 261 0.5287 MGWTREENRRFEDALAVYGPEDPDRWQHVANAVAGKSAQEVKRHYEILMEDVSRIERDQVPLPRYVHSRRTAQHEPCGMMRNLNLR 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0140 86 FunFam Transcription factor SRM1 1 62 - -
Lele28g0140 86 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Lele28g0140 86 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Lele28g0140 86 SMART sant 3 51 IPR001005 -
Lele28g0140 86 CDD SANT 3 45 IPR001005 -
Lele28g0140 86 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Lele28g0140 86 Gene3D - 1 62 - -
Lele28g0140 86 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Lele28g0140 86 Coils Coil 38 58 - -
Lele28g0140 86 SUPERFAMILY Homeodomain-like 2 56 IPR009057 -
Lele28g0140 86 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 73 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0140 Lele-ChrLele28 811486 812270 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele28g0140 Myb_DNA-binding 6.6e-07 CL0123