Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0131 ATGTTTGGCCATCTGCTTCAGTGGCTTCCAATGTCTTGCTGCTATTGGGGTATCTTTGTTGCTGTGGTTGTTACAGTAGGTCATAGAGCGTGGAATCTATGGTACAATAGCGAGTCAGAAGGGGGGATTCCTCCGGGAAATCGAGGACTTCCGTTTGTCGGAGAAACACTTTATTTCATGGCCGCCATTAATAGCCCACAAGGAGTCTATGAATTCGTCCGATCTCGCCGCCTCCGATATGGGAGATGCTTCAAGACGAGGTTATTCGGGGAAACGCACGTTTTTATGTCGAGCATGGAATCGGCAAAAGCCATTCTAAACAACGACGTTGGCAAATTCTCGAAGAGGTACATAAAGTCAATCGCCGAACTGATTGGCCCTCACAGCTTGCTCTGCGCTTCTCATCACCATCACAAGCTCATCCGGGCCCACCTCCTCTCTCTCTTCTCAACTCACTCTCTCTCCTCTCTTGTTATCCACTTCGATCGACTGGTCGTAGAATCCTTCCATGGCTGGCCACGTCACGGCCTCGTCGTCATTCAACAAGAAGCTCTCCAGATAACTTGTAAAGCGATGTGCAAAATGGTGATGAGCGTTGAGAGCGGGTATGAATTGGAGAGGATGCAGAGAGAGGTGGGCCGTGTATGTGAAGCCATGCTTGCCTTTCCTCTGAGGTTCAAGTGGACCAGATTCTATAAGGGCCTTCAGGCTAGAAAAAGGATCATGGACATATTGGAGAAGGCGATGAATGAAAGAAGAAGCGGATGGGCATGTGGTCATCAAGATTTTCTTCAACGGCTTTTAACAGGAAATGGCAATAAATTCAATGAGCAAGAGGTGAGAAGGCTAACGGATGAAGAGGTCCGAGATAATATATTGACCATGATAATCGCCGGTCAGGACACAACAGCTAATGCAATTACATGGATGGTCAAATTCGTGGGTGAGAATCAGGAGGTTCTTCATAATCTTATGAAGGAGCAACTTGAAATTGCGAAAAGATGCGACAGTTCGCATCTTACAATCGAGGATCTTAATGAGATGCCGTTCGCTTCCAAGGTGGCCAAAGAAGCGTTAAGAATGGCTTCTGTTGTTCAGTGGTTCCCAAGAGTGGCACTGGAGGACTGCGAGATTGAAGGATTCAAAATCAAGAAAGGGTGGAACGTGAGCATCGATGCCAGATCAATACACTTGGACCCAACGGTGTACGATGATCCGGGCGTTTTCAATCCTTCAAGATTTCATGCCAAGTCAAAAGCACACGGCTTCTTACCATTTGGGGTGGGAGGAAGGTCGTGCCTTGGGAAGAACATGGCTAAAGCCATGATGCTGGTGTTTCTCCATCGTCTCGTCACCACTTACAAGTGGAAGGTGATTGATTCTGACTCAAGTATCGAGAAATGGTCACTTTTTTCAAAACTAAGAAGCGGATGTCCGGTTCGCTTGACGTCAATTAAGGACATCCACAAAACTACGTGA 1479 0.4706 MFGHLLQWLPMSCCYWGIFVAVVVTVGHRAWNLWYNSESEGGIPPGNRGLPFVGETLYFMAAINSPQGVYEFVRSRRLRYGRCFKTRLFGETHVFMSSMESAKAILNNDVGKFSKRYIKSIAELIGPHSLLCASHHHHKLIRAHLLSLFSTHSLSSLVIHFDRLVVESFHGWPRHGLVVIQQEALQITCKAMCKMVMSVESGYELERMQREVGRVCEAMLAFPLRFKWTRFYKGLQARKRIMDILEKAMNERRSGWACGHQDFLQRLLTGNGNKFNEQEVRRLTDEEVRDNILTMIIAGQDTTANAITWMVKFVGENQEVLHNLMKEQLEIAKRCDSSHLTIEDLNEMPFASKVAKEALRMASVVQWFPRVALEDCEIEGFKIKKGWNVSIDARSIHLDPTVYDDPGVFNPSRFHAKSKAHGFLPFGVGGRSCLGKNMAKAMMLVFLHRLVTTYKWKVIDSDSSIEKWSLFSKLRSGCPVRLTSIKDIHKTT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0131 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Lele28g0131 492 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 Pfam Cytochrome P450 44 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 SUPERFAMILY Cytochrome P450 41 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 Gene3D Cytochrome P450 35 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0131 492 PANTHER CYTOCHROME P450 26 41 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0131 Lele-ChrLele28 771252 773930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0131 14 456 Cytochrome P450 AT1G19630 57.589 0.0 538