Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0123 ATGTGTGAGAGATTAAATTGTAAACTACTCTCTGTTTATGAGAGACCAGCTTGGGGTTTGGTTGTTTACTGTTTACATGTTCAGAGCTGTTTTATATCTGAGCTAGTAACTGGCTTTGAGTTGTATATAAGCATGGTTTGCAATAATAATGGCGTTCATCTCATGCAGTCACGTGCTCGTGTTTTCACCCACAAAAGCAAGACGGTGAAGGACGAAGCTAGCTCCACGTGGGGGGGATGCACACAAATGCAGTGGAAGATTGCTTATGAACAAAGGATGATCTCTGCCAAGGCAAGTGTACTTGATACCATGGATGACACCGCCTTCAATTTGTTGCCTGCTTCGTTAGTTTTATCATTTCCTTGTCTCTTCGTCAGTGAAATCCTTCGTTCCGGGTTTATGATAAATTCTTCCCGGAGGCGCAGGACCCACTTAGTTCAGTCCTTCTCTGTTGTGTTCCTCTACTGGTTCTATGTATCATATCTCATGGGCTCGCCCAGTGGAGATTCCTCCATCTGCACCAAATTTCAGAGCTCTGGTTCTGAGGAGGATTTGCAGGTTTTGATGGATCAGAGGAAAAGGAAGAGAATGCAATCGAATCGGGAATCGGCAAAGCGATCCCGTATGCGAAAGCAGAAGCAGCTGGATGATCTGATGGGCCAGGTGAATGAACTGAGAAAGGAAAATAGCGAAATCCTGACGAGCATAAACATCACCACGCAACACTACGTGAAAGTTGAGGCCGAAAACTCCGTATTGATTGCTCGAATGGCAGAACTTAGCCACAGGCTCCAATCACTGGACGATATCCTCAGTTACATAAACACCAGCACCGGGGTGTATGAAACCGATTGCTACTTCTACGAGAGCAGATAA 876 0.4532 MCERLNCKLLSVYERPAWGLVVYCLHVQSCFISELVTGFELYISMVCNNNGVHLMQSRARVFTHKSKTVKDEASSTWGGCTQMQWKIAYEQRMISAKASVLDTMDDTAFNLLPASLVLSFPCLFVSEILRSGFMINSSRRRRTHLVQSFSVVFLYWFYVSYLMGSPSGDSSICTKFQSSGSEEDLQVLMDQRKRKRMQSNRESAKRSRMRKQKQLDDLMGQVNELRKENSEILTSINITTQHYVKVEAENSVLIARMAELSHRLQSLDDILSYINTSTGVYETDCYFYESR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0123 291 SUPERFAMILY Leucine zipper domain 192 245 IPR046347 GO:0003700|GO:0006355
Lele28g0123 291 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 195 210 IPR004827 GO:0003700|GO:0006355
Lele28g0123 291 MobiDBLite consensus disorder prediction 191 210 - -
Lele28g0123 291 Pfam bZIP transcription factor 192 247 IPR004827 GO:0003700|GO:0006355
Lele28g0123 291 CDD bZIP_plant_GBF1 193 243 IPR045314 GO:0003700|GO:0006355
Lele28g0123 291 Coils Coil 194 235 - -
Lele28g0123 291 SMART brlzneu 188 252 IPR004827 GO:0003700|GO:0006355
Lele28g0123 291 FunFam BZIP transcription factor 190 241 - -
Lele28g0123 291 PANTHER BZIP TRANSCRIPTION FACTOR 44 177 274 - -
Lele28g0123 291 Gene3D - 190 245 - -
Lele28g0123 291 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 253 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0123 Lele-ChrLele28 730637 736449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0123 188 277 bZIP Transcription Factor Family AT4G34590 70.000 1.14e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele28g0123 bZIP_1 9.6e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0114 25 719950 720732 Lele28g0123 28 730637 736449 hybridization
Lele26g0124 26 726719 727180 Lele28g0123 28 730637 736449 hybridization