Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0120 ATGATGTACCCGAACGAAGCTTTTTCTTCTGGGTCCTACGTGGAGATGTTTTCTGGGAATTCTCTTTTATCTCATAACTTCACAGAAACTGTAGGAAGCCAAAATGAGGTGAAGTTCATCCCAGGCGTAGGTGACACTGTGGGCATGCAATCTATTGATGGTCATTCCAACACTGCAACAGGTGATCCATCTGTCAACTCCTTCACAAGGACGCAATTGGGGCTCGTTGACACTGAACAACACAACATACAGAGCCAGGGCTTATCTCTTAGCCTTGGCACACTCATGCCTGTCCCTCCCTTCCAATACCACTATCCCTCCACCGGCTTTTCGTCTCTTATGTCTCCAAGTCTTCCTAACTTTAAGGGCACGGTTTCTCTTAAAGATGGCGAACCAAGTTCTGAATACATGGCGCCTATTTCTTCTGGAGGTTTTAACAGCTCCATCCAAAAGGAGGCTCTGTACAATCCACACTCCTCACTCTACCGCAAGGAAGTTTCCAATGATCCGTCATGTCTGCATGGGACACAAGGTTTTTCAAACGCCGCCTTAAACTCTCAATACCTTAAAGCAGCTCAGGAATTGCTCGATGAAATAGTTAATGTACGAAAGGCTTTGAAGCAACCTGGACTGGAAAAGCAAAAAGGTTCCCGTGACATTGGATTAGACGGCTCCAAAGAGTCCGACGAAAAGTCTACCAGTCAATCTATGCAGAACCAGGACCCTAATGCTACATCTGCCAATGCGTCGTGTGAATTGTCACCAGCAGAACGGCAGAATTTGTTGGATAAGAAGGCAAAGCTTTTATCCATGTTAGACGAGGTAGATAAAAGATACCGGCAGTACTGCCATCAGATGCAAATGGTGGTATCATCTTTTGATATGGTTGCTGGTTGTGGGGCTTCTGAACCATACACTGCACTTGCTTTGCGAACAATTTCTCGCCATTTTCGCTGTTTGCGTGATGCTATTAGTGGCCAAATTCAAGTGACTCAGAGGAGCCTTGGAGAACAAGAGGGGATACCTCGTCTCCGCTATGTTGATCAGCAGCTAAGGCAACAAAAGGCCCTTCAGCAGCTTGGCGTTATGCGTCAAGCTTGGAGGCCCCAGAGGGGACTTCCTGAAAGTTCTGTTTCAATACTCCGTGCTTGGCTCTTTGAGCATTTCCTTCATCCTTACCCAAAGGATTCGGAGAAAATTATGCTGGCAAGGCAAACAGGCCTGACCAGGAACCAGGTGGCAAACTGGTTCATCAATGCAAGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAAGAAGAGTTTGGTGATTCCGAGATGGCAAGCTGCAATCTCTCATCTGAAAGTACTCCCCAAGCTCCAAGAGATAATAAAGGGGAAGAGTCGCAGGACAATGTGAAAGCTGCTAAGAATGTCCAACATGGGCAGCTTCATGGGTTGAAGCTAGACCATAGCTCCGCCAGAGGATTTGATACTGCCCATGGAGGAGCTGTCATGCATTCTGGAATCATGAAATTGCATGGTGATCAACGGCCTAATATGAACAATACCCTTTATTCGAGCGGACCTATGCCAACCAGCCACAACGGTGATGGCTGCCTAATGCCTTCTGATCCGGCAGCCTCATACGATTTATCAGAGTTGGGTGGTTTTCCGGTGGGTGGCCATGTGTCTCTTGCGTTGGAGTTGCGCAACTGTGAAACTGGGGAATTCGCCACGTCTGATGATGGTTTCAACAAACAACGCAACCAGACGTTAGATTCTCCCCCAGAAAATAATTTGATTGATTATCATTTCACAGATTCAGGAAAGCAACCAAACAGGTTCAGTAATCCTCATCTATTGCATGAGTTTGTCGTCTAA 1869 0.4666 MMYPNEAFSSGSYVEMFSGNSLLSHNFTETVGSQNEVKFIPGVGDTVGMQSIDGHSNTATGDPSVNSFTRTQLGLVDTEQHNIQSQGLSLSLGTLMPVPPFQYHYPSTGFSSLMSPSLPNFKGTVSLKDGEPSSEYMAPISSGGFNSSIQKEALYNPHSSLYRKEVSNDPSCLHGTQGFSNAALNSQYLKAAQELLDEIVNVRKALKQPGLEKQKGSRDIGLDGSKESDEKSTSQSMQNQDPNATSANASCELSPAERQNLLDKKAKLLSMLDEVDKRYRQYCHQMQMVVSSFDMVAGCGASEPYTALALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMASCNLSSESTPQAPRDNKGEESQDNVKAAKNVQHGQLHGLKLDHSSARGFDTAHGGAVMHSGIMKLHGDQRPNMNNTLYSSGPMPTSHNGDGCLMPSDPAASYDLSELGGFPVGGHVSLALELRNCETGEFATSDDGFNKQRNQTLDSPPENNLIDYHFTDSGKQPNRFSNPHLLHEFVV 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0120 622 MobiDBLite consensus disorder prediction 231 251 - -
Lele28g0120 622 SMART HOX_1 367 431 IPR001356 GO:0003677
Lele28g0120 622 MobiDBLite consensus disorder prediction 444 479 - -
Lele28g0120 622 ProSiteProfiles 'Homeobox' domain profile. 364 427 IPR001356 GO:0003677
Lele28g0120 622 MobiDBLite consensus disorder prediction 210 230 - -
Lele28g0120 622 SUPERFAMILY Homeodomain-like 368 435 IPR009057 -
Lele28g0120 622 MobiDBLite consensus disorder prediction 574 593 - -
Lele28g0120 622 Coils Coil 258 278 - -
Lele28g0120 622 CDD homeodomain 367 428 IPR001356 GO:0003677
Lele28g0120 622 Pfam Associated with HOX 184 325 IPR006563 -
Lele28g0120 622 Gene3D - 364 441 - -
Lele28g0120 622 MobiDBLite consensus disorder prediction 573 594 - -
Lele28g0120 622 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 128 454 - -
Lele28g0120 622 MobiDBLite consensus disorder prediction 210 251 - -
Lele28g0120 622 Pfam Homeobox KN domain 384 423 IPR008422 GO:0003677|GO:0006355
Lele28g0120 622 SMART prehox3 177 326 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0120 Lele-ChrLele28 719473 721774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0120 167 498 Homeobox Transcription Factor Family AT2G16400 56.433 5.82e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele28g0120 POX 2.2e-50 No_clan