Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0114 ATGAACAAAACCCATTATCGCCTGGAGATTAGGAGAAGAAGAACCGCCATGTCCTATATTCTGAGGCGGTATGAATTGGACATCTCCCTAGTGGCAGTTTCAGTCGCAGACCAGTCCCTGCTCCGGACGGATCGGTTCGTCTCCGCAAGTCGGGTTATTCTAAACCCAACAACCTCCTGCTTACACGCTTTTCGTTTGCGCTGGACGCACAACGGGCAAGGATTCATCGTTTCTCTGCCGCGTCGGAGTATCCTGAGCCCAGCCCCATCGACGCCCGGAAACTGCTCATTATTCATCATGGACGTCGATCCCCGCCAATACGAAAACCTCGCTGTAAATGATAATGACATCCAAAACATAGTTCTGTCGTATCTTATCCATAATTGCTACAAAGAATCAGTGGAGTCATTTATTGCTTGCACCGAAATGAAGCAACCTGCAGATTATCTAGAAGACATGGAAAAAAGAAAAAGAATTTTTCACTTTGCATTAGACGGAAATGCACTCAAGGCCATTGAGCTGACTGAACAGCTGGCACAGGATATTCTTGAGAAGAATAAGGACTTACGGTTTGATCTTTTAAGCCTTCATTTTGTTGAGCTTGTCCGCTCTAGGAAATGCACAGAAGCTTTGGAGTTTGCTCAGAGTCAGTTGAGCCCTTTTGGGAAGGAGAAGAAATACATGGAAAAGCTTGAGGACTTTATGGCCCTTCTTGCTTATAAAGAGCCTGAGAAATCCCCAATGTTTCATCTGCTTAGCTTAGAGTACCGGCAGCAGGTTGCAGATAGTTTAAATCGAACTATTCTTGAACATTCCAATCTTCCCAGCTACACAGCAATGGAGAGGCTTATCCAGCAAGCTACGGTAGTTAGGCAGTGCTTAAGTCAAGAGGCTGGAAAGGATGGGCCTCCACCTTTTTCATTGAAAGATTTTCTCAAAAGTTGA 945 0.4519 MNKTHYRLEIRRRRTAMSYILRRYELDISLVAVSVADQSLLRTDRFVSASRVILNPTTSCLHAFRLRWTHNGQGFIVSLPRRSILSPAPSTPGNCSLFIMDVDPRQYENLAVNDNDIQNIVLSYLIHNCYKESVESFIACTEMKQPADYLEDMEKRKRIFHFALDGNALKAIELTEQLAQDILEKNKDLRFDLLSLHFVELVRSRKCTEALEFAQSQLSPFGKEKKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRTILEHSNLPSYTAMERLIQQATVVRQCLSQEAGKDGPPPFSLKDFLKS 314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0114 314 SMART ctlh 152 209 IPR006595 -
Lele28g0114 314 PANTHER RAN BINDING PROTEIN 9-RELATED 69 299 - -
Lele28g0114 314 Pfam CTLH/CRA C-terminal to LisH motif domain 153 291 IPR024964 -
Lele28g0114 314 ProSiteProfiles LIS1 homology (LisH) motif profile. 113 145 IPR006594 GO:0005515
Lele28g0114 314 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 152 209 IPR006595 -
Lele28g0114 314 SMART toby_final6 205 300 IPR013144 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele28g0114 Lele-ChrLele28 687834 691687 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0103 25 668494 678510 Lele28g0114 28 687834 691687 hybridization
Lele26g0114 26 680350 684079 Lele28g0114 28 687834 691687 hybridization