Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0108 ATGGCTGGCTTCTTCTCTCTAGGCCCACAGAACAAACAAGTAGAAGAAAAGGAAGATAACAGCAACAGTAACAACCTATTCTTGTTCAGGAACGAGGAGATCTACAACAAAGGATTCGAGATATGGCCACAGTCCTATCAACCGCATCACAACTTGAGCAGCTACTACTCGTTTGGGGCCGGTCCTAGTCGCAGAAACTCCTCCAACGACGACGTCGTCTCTGACGACTCTACCAGGTTCGGATTCACGGTCATGCGGTCTGGAGGTTTAGGAGGTGGCATGAACTGTCAGGATTGTGGCAACCAAGCTAAGAAGGACTGTCCACATCTCAGATGCAGAACTTGCTGTAAGAGCCGAGGGTTTCAGTGCCAAACCCACGTCAAGAGCACTTGGGTTCCCGCAGCTAAACGGCGCGAACGACAGCAACAATTGGCTACGTTGCAGCAGCAGCAGGACCAACAATTTAGGGGAGATAATTCCAAACGACACCGAGAAAATCAAGCTTCCGGCTCTCTTGCCTGCGCTCCATTGATGCCAATTGCCACTACAGGGTTGGAACTGGGACAATTCCCACAAGAGGTGAACTCTTCGGCCGTGTTCCGCTGTGTGAGAGTAAGCGCAATGGACAGCCCAGAGGACCAGTACGCGTATCAAACGGCTGTGAACATCGGAGGTCACCTTTTCAAGGGAATTCTGTATGACTATGGCCCTGAAGGTGCTTACACCACAGGTGGTGAGAGCTCCTCCGGTGGAGCTGAAGCTCAACAATTAAATCTCATAACCGCGTCGACCACCACGAACACAGCGACAACAAGCGCCAACCCATTTGATCCATCTTCACTATACCCGGCTCCGCTGAATGCCTTCATGGCTGGTACGCAATTCTTCCCACCTCCAAGGTCCTAA 906 0.5143 MAGFFSLGPQNKQVEEKEDNSNSNNLFLFRNEEIYNKGFEIWPQSYQPHHNLSSYYSFGAGPSRRNSSNDDVVSDDSTRFGFTVMRSGGLGGGMNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLATLQQQQDQQFRGDNSKRHRENQASGSLACAPLMPIATTGLELGQFPQEVNSSAVFRCVRVSAMDSPEDQYAYQTAVNIGGHLFKGILYDYGPEGAYTTGGESSSGGAEAQQLNLITASTTTNTATTSANPFDPSSLYPAPLNAFMAGTQFFPPPRS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0108 301 MobiDBLite consensus disorder prediction 1 21 - -
Lele28g0108 301 Pfam Domain of unknown function (DUF702) 93 238 - -
Lele28g0108 301 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 287 IPR007818 GO:0003700|GO:0006355
Lele28g0108 301 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 189 237 IPR006511 -
Lele28g0108 301 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 95 137 IPR006510 -
Lele28g0108 301 MobiDBLite consensus disorder prediction 149 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0108 Lele-ChrLele28 636758 638107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0108 1 301 C2H2 Transcription Factor Family AT1G75520 48.352 3.19e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele28g0108 DUF702 2.2e-65 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0108 28 636758 638107 Lele02g0961 02 5844371 5846292 CCT
Lele25g0099 25 625259 627705 Lele28g0108 28 636758 638107 hybridization
Lele26g0109 26 624116 626566 Lele28g0108 28 636758 638107 hybridization