Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0104 ATGCCTGCGACCACCGGGTCCACCATGCCAACAAGCTCGCCTCCAAGCACCAACGCTTTTCTCTTCACCGCCCTTCTCCCAACCAATTCCCTCTCTGCGATATTTGCCTGAGCTTCCGTGTTCTGCCAACAGGACAGAGCAATTCTATGCAAAGATTGTGACACGCCGATTCACTCGACCAATGAGCACACCCGGAAGCACAGTAGGTTTCTTCTAACGGGGATTGAGCTCTCTGCTGCTGCTACGCCGTATTCACCATCAACTTCCAATCCCCTTTTGACAAATGGTTTGGATTCCATCTCTAATTCCAAGTCCCAGAATTTAGCAAATAACTCTGTTTCTCCTTCTTCTGCCATCTCACATCCCACTTCAGTGGAGAAGACTTCACCTTCGACAGCATCAACACATCCCACAATTAACAAGGCTGGGGGGAACTTGTCAACGAACGAAGGGATTGTTTCCACGAGTAGCATATCTGAGTATTTGATAGAGACTCTCCCGGGCTGGCAGGTCGACGACTTTCTCGATTCCTCTGCTGTTCCGTTTGGTTTCAGTAAGAGTGTTGATATGTTGTCTGTGTTTGATGCTGATATTGAGGGAAATATGGGTCCTTTCTCTCCCGAGAGCATGGGGATCTGGGTTCCTCAGGCACCCACTTCTCTGTTTACTCCACAAGTGGATCGGCAGATCAAGTTCCAAGAGACAAAAGAGGCGACAACCATTGAGGACAGCAGATCAAGGTCGAGGGATGATAATTTCATAGTTCCACAAATCGGCCCTCCTAGTGGTTCCAAGAGATCCAGACTTCTTCGGTAG 816 0.489 MPATTGSTMPTSSPPSTNAFLFTALLPTNSLSAIFAXASVFCQQDRAILCKDCDTPIHSTNEHTRKHSRFLLTGIELSAAATPYSPSTSNPLLTNGLDSISNSKSQNLANNSVSPSSAISHPTSVEKTSPSTASTHPTINKAGGNLSTNEGIVSTSSISEYLIETLPGWQVDDFLDSSAVPFGFSKSVDMLSVFDADIEGNMGPFSPESMGIWVPQAPTSLFTPQVDRQIKFQETKEATTIEDSRSRSRDDNFIVPQIGPPSGSKRSRLLR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0104 271 SMART bboxneu5 36 72 IPR000315 GO:0008270
Lele28g0104 271 MobiDBLite consensus disorder prediction 88 150 - -
Lele28g0104 271 MobiDBLite consensus disorder prediction 236 250 - -
Lele28g0104 271 CDD Bbox1_BBX-like 36 72 - -
Lele28g0104 271 PANTHER B-BOX ZINC FINGER PROTEIN 22 37 261 - -
Lele28g0104 271 MobiDBLite consensus disorder prediction 236 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0104 Lele-ChrLele28 608343 609410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0104 38 268 C2C2-CO-like Transcription Factor Family AT1G75540 38.321 4.69e-41 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0104 28 608343 609410 Lele01g0961 01 5552176 5553625 CCT
Lele28g0104 28 608343 609410 Lele03g0957 03 5572198 5576493 CCT
Lele28g0104 28 608343 609410 Lele04g0956 04 5916811 5918198 CCT
Lele25g0097 25 593852 595005 Lele28g0104 28 608343 609410 hybridization
Lele26g0105 26 597360 598509 Lele28g0104 28 608343 609410 hybridization