Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0100 ATGGTTGCCATGCACATGCAGTTACTACACAACGACCGTGTTGTCATCTTCGAACGCACCTACTTGGGCCTCTCCAATCTATCACTGCCTACTGGCAAATGCCGCTACAACCCCAACGAGAAGGTTGTTAAGGTCGACTGCACTGCTTACTCCATCGAGTACGACGTCGCCTCCAATACTTTCCGCCCACTATTCGTCCAGACTGATGTCTGGTGCTCCTGTGGTTCCGTCACCCCCGACGGCCGTCTCGTTCAGACTGGCGGCTTCAACGACGGCGAACGTGCTGTCAGGGTGTTCAGTCCTTGCCCCACCTGTGACTGGCAGGAACGAAATGGCTCACTCGCAGCTCGTAGGTGTGCAGACCAACGACCTCGGTGCCGAGAACAACTTGTACCCCTTCGTTTTTCTGAACGGGGACGGCAATTTGTTCATCTTCGCCAACAATCGAGCTATCCTGTTCGATTACAGGAAGAACAGAGTGGTCAAGACATTCCCACCAATACCGGGAGGAGATCCGAGGTGTTATCCGAGCACTGGATCGGCGGTCTTGTTACCTTTGAGGAATTTGCGAAAGCCGTCGATCGAAACGGAGGTTTTGATTTGTGGTGGATCCCCGAAAGGCTCTTTTCAGCAGGCCAACCAGAGCAGTGTTTTCCTCGGAGCCTTGAATACCTGCGCTCGGATAAAAATAACCGACCCCAACCCGCAGTGGGTAACCGAGAGGATGCCGGGAGCCAGGGTCTTGACCGACATGCTCATTCTTCCAAACGGCAACGTTTTGATAATCCATGGAGCCGCCATGGGCAGGGCTGGATGGGAATTGGGGCGGAACCCGAGGCGGAGTTTTCAAGCGTGCGTCCGAAGATTCTATCGCCTGCTTCTCAGACCAGGGTCACGTATGGGGGGCAGAGGCTGCTGGTGTTGGACTTTAGCAAAGTATCCAACCTCGGAGAATCGACATACGGAGTTGAGGTCGTCAGTCTCGGTTCGTCTGTCCTGGCACCACCCGGTTTCTATCTGCTGTTTGTGGCTCATCAAGAAATTCCCAGCCAGGAGGGAGAACAATCAAATGGGATATTTAAGGTTCTTGGCAGCTTCAACTACTACTTCTCCATGCAAGAGGAGGAGATTGATGATCGGCTGTTTCTTCCTGTTCTCTCCTGA 1164 0.5344 MVAMHMQLLHNDRVVIFERTYLGLSNLSLPTGKCRYNPNEKVVKVDCTAYSIEYDVASNTFRPLFVQTDVWCSCGSVTPDGRLVQTGGFNDGERAVRVFSPCPTCDWQERNGSLAARRCADQRPRCREQLVPLRFSERGRQFVHLRQQSSYPVRLQEEQSGQDIPTNTGRRSEVLSEHWIGGLVTFEEFAKAVDRNGGFDLWWIPERLFSAGQPEQCFPRSLEYLRSDKNNRPQPAVGNREDAGSQGLDRHAHSSKRQRFDNPWSRHGQGWMGIGAEPEAEFSSVRPKILSPASQTRVTYGGQRLLVLDFSKVSNLGESTYGVEVVSLGSSVLAPPGFYLLFVAHQEIPSQEGEQSNGIFKVLGSFNYYFSMQEEEIDDRLFLPVLS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0100 387 PANTHER SECRETED PROTEIN-RELATED 274 351 - -
Lele28g0100 387 MobiDBLite consensus disorder prediction 228 265 - -
Lele28g0100 387 Pfam Galactose oxidase-like, Early set domain 284 351 IPR015202 -
Lele28g0100 387 SUPERFAMILY Galactose oxidase, central domain 31 111 IPR011043 -
Lele28g0100 387 Gene3D - 1 122 IPR037293 -
Lele28g0100 387 Pfam Glyoxal oxidase N-terminus 4 118 IPR009880 -
Lele28g0100 387 Gene3D Immunoglobulins 271 355 IPR013783 -
Lele28g0100 387 MobiDBLite consensus disorder prediction 244 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0100 Lele-ChrLele28 565928 569495 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0090 25 539074 540771 Lele28g0100 28 565928 569495 hybridization
Lele26g0100 26 555895 558347 Lele28g0100 28 565928 569495 hybridization